RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DLL1O00548 723 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 AMHP03971 560 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 PLA2G4BP0C869 781 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 ATP2A2P16615 1042 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 ARL2P36404 184 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 RNF149Q8NC42 400 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 ASAP3Q8TDY4 903 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 SPATA32Q96LK8 384 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 RCOR1Q9UKL0 485 aa21.81■■□□□ 1.08
SHKBP1-214ENST00000597396 SFPQP23246 707 aaKnown RBP eCLIP21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 PHKA2P46019 1235 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 DEFB103AP81534 67 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 DHX8Q14562 1220 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 ZNF697Q5TEC3 545 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 RRAGBQ5VZM2 374 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 RINT1Q6NUQ1 792 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 MYOCDQ8IZQ8 938 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 SYT2Q8N9I0 419 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 PHOSPHO2Q8TCD6 241 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 CHAMP1Q96JM3 812 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 RUSC1Q9BVN2 902 aa21.8■■□□□ 1.08
SHKBP1-214ENST00000597396 COL6A3P12111 3177 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 GRXCR1A8MXD5 290 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 CSDE1O75534 798 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 FGFR4P22455 802 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 GLRA2P23416 452 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 SMAD3P84022 425 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 CAPSQ13938 189 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 SRGAP1Q7Z6B7 1085 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 RAD54LQ92698 747 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 KIFAP3Q92845 792 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 GUCD1Q96NT3 240 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 IFT122Q9HBG6 1241 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 STK17AQ9UEE5 414 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 CIZ1Q9ULV3 898 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 PCDHA7Q9UN72 937 aa21.79■■□□□ 1.08
SHKBP1-214ENST00000597396 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 DENND3A2RUS2 1198 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 LRRIQ4A6NIV6 560 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 SLC12A3P55017 1021 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 MCM6Q14566 821 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 CCDC73Q6ZRK6 1079 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 FAM43BQ6ZT52 329 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 C1orf186Q6ZWK4 172 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 CATSPER4Q7RTX7 472 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 LEO1Q8WVC0 666 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 LARP4BQ92615 738 aaKnown RBP21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 IFT74Q96LB3 600 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 SCAND2PQ9GZW5 306 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 TMX1Q9H3N1 280 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 POLD4Q9HCU8 107 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 BLOC1S4Q9NUP1 217 aa21.78■■□□□ 1.08
SHKBP1-214ENST00000597396 ENPP3O14638 875 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 ZSCAN20P17040 1043 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 STAT6P42226 847 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 PTENP60484 403 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 PPP2R5AQ15172 486 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 AXDND1Q5T1B0 1012 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 GPBP1Q86WP2 473 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 HERC6Q8IVU3 1022 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 LRRC15Q8TF66 581 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 LINC01599Q8WXQ3 324 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 DRC1Q96MC2 740 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 ZBED2Q9BTP6 218 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 TIPINQ9BVW5 301 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 PANK2Q9BZ23 570 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 KCND2Q9NZV8 630 aa21.77■■□□□ 1.08
SHKBP1-214ENST00000597396 HIP1RO75146 1068 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 IBSPP21815 317 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 GUCY2CP25092 1073 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 POU5F1BQ06416 359 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 RAD51AP2Q09MP3 1159 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 RAB30Q15771 203 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 FAM117BQ6P1L5 589 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 SHC4Q6S5L8 630 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 TMCO2Q7Z6W1 182 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 ZBTB8OSQ8IWT0 167 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 PDILTQ8N807 584 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 ADAM2Q99965 735 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 TSPYL2Q9H2G4 693 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 FAM13BQ9NYF5 915 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 MSRAQ9UJ68 235 aa21.76■■□□□ 1.07
SHKBP1-214ENST00000597396 INO80B-WBP1J3KQ70 363 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 MGEA5O60502 916 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 UPP2O95045 317 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 KRT18P05783 430 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 NAMPTP43490 491 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 RABGGTBP53611 331 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 RTN4RL1Q86UN2 441 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 IFNLR1Q8IU57 520 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 DEPTORQ8TB45 409 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 BSNDQ8WZ55 320 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 MINDY3Q9H8M7 445 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 C1orf112Q9NSG2 853 aa21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 RBM19Q9Y4C8 960 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-214ENST00000597396 TLL1O43897 1013 aa21.74■■□□□ 1.07
SHKBP1-214ENST00000597396 ERLIN2O94905 339 aa21.74■■□□□ 1.07
SHKBP1-214ENST00000597396 DSC3Q14574 896 aa21.74■■□□□ 1.07
SHKBP1-214ENST00000597396 NFKBIZQ9BYH8 718 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms