RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PCDHA6Q9UN73 950 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 PCDHA8Q9Y5H6 950 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 C22orf31O95567 290 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 CYP21A2P08686 494 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 FGFR1P11362 822 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 NPR3P17342 541 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 EIF4BP23588 611 aaKnown RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 SETQ01105 290 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 TBC1D8BQ0IIM8 1120 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 ZNF528Q3MIS6 628 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 ZNF746Q6NUN9 644 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 LLGL2Q6P1M3 1020 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 LRRC55Q6ZSA7 311 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 CABP7Q86V35 215 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 CHD1LQ86WJ1 897 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 ECHDC2Q86YB7 292 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 SLC22A17Q8WUG5 538 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 RUBCNQ92622 972 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 MAP7D2Q96T17 732 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 RWDD1Q9H446 243 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 AGO4Q9HCK5 861 aaKnown RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 ZNF302Q9NR11 478 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 TBC1D22BQ9NU19 505 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 RNF19AQ9NV58 838 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 SSX2IPQ9Y2D8 614 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-215ENST00000592911 GPR179Q6PRD1 2367 aa9.88□□□□□ -0.83
SMAD4-215ENST00000592911 ZBTB42B2RXF5 422 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 BACH1O14867 736 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 SREBF1P36956 1147 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 MAGEA9P43362 315 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 RAB27AP51159 221 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 NUCB1Q02818 461 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 APOBRQ0VD83 1088 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 LETM2Q2VYF4 491 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 CASC1Q6TDU7 716 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 MB21D2Q8IYB1 491 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-215ENST00000592911 GPR65Q8IYL9 337 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 LINC01465Q8N7H1 131 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 FLCNQ8NFG4 579 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 HDAC7Q8WUI4 952 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 TRAPPC12Q8WVT3 735 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 RMDN1Q96DB5 314 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 OSMRQ99650 979 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 EMILIN2Q9BXX0 1053 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 KCNK12Q9HB15 430 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 LY9Q9HBG7 655 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 RIC8AQ9NPQ8 531 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 EPS15L1Q9UBC2 864 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 TCEAL9Q9UHQ7 104 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 FBXL21Q9UKT6 434 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 GINS2Q9Y248 185 aa9.87□□□□□ -0.83
SMAD4-215ENST00000592911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 E7EWF7 191 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 SPTLC1O15269 473 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 CXCL14O95715 111 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 ASGR2P07307 311 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 MCM5P33992 734 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 BCAR1P56945 870 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 ITGB3BPQ13352 177 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 KIZQ2M2Z5 673 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 CLLU1OSQ5K130 101 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 RARS2Q5T160 578 aaKnown RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 CCDC60Q8IWA6 550 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 VPS52Q8N1B4 723 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 SRBD1Q8N5C6 995 aaKnown RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 MARVELD3Q96A59 401 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 IGSF21Q96ID5 467 aa9.86□□□□□ -0.83
SMAD4-215ENST00000592911 INO80BQ9C086 356 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-215ENST00000592911 MAP1BP46821 2468 aaKnown RBP9.85□□□□□ -0.83
SMAD4-215ENST00000592911 CCDC69A6NI79 296 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 ZNF623O75123 536 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 PSAPP07602 524 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 CYP3A4P08684 503 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 SRFP11831 508 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 DARSP14868 501 aaKnown RBP9.85□□□□□ -0.83
SMAD4-215ENST00000592911 SP100P23497 879 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-215ENST00000592911 TMTC3Q6ZXV5 915 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 SIX5Q8N196 739 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 KCNG4Q8TDN1 519 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 APOL5Q9BWW9 433 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 OSBPL6Q9BZF3 934 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 ADAMTS10Q9H324 1103 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 SLC2A4RGQ9NR83 387 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 RBM28Q9NW13 759 aaKnown RBP9.85□□□□□ -0.83
SMAD4-215ENST00000592911 KANSL3Q9P2N6 904 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 HCSTQ9UBK5 93 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 PCDHA10Q9Y5I2 948 aa9.85□□□□□ -0.83
SMAD4-215ENST00000592911 CNOT1A5YKK6 2376 aaKnown RBP9.85□□□□□ -0.83
SMAD4-215ENST00000592911 FAM208BQ5VWN6 2430 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 MED19A0JLT2 244 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 PRR5-ARHGAP8B1AHC4 643 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 IPO5O00410 1097 aaKnown RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 DHX15O43143 795 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms