RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 NDUFB9Q9Y6M9 179 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 H3BRB1 525 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ADH1AP07327 375 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 SLC10A3P09131 477 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 EEF1GP26641 437 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ATN1P54259 1190 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 GSE1Q14687 1217 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TTC23LQ6PF05 361 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 RYBPQ8N488 228 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 DAGLBQ8NCG7 672 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 AFAP1L1Q8TED9 768 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ATP8B4Q8TF62 1192 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 CEP63Q96MT8 703 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ALDH1A2O94788 518 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 UPP2O95045 317 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ATP5DP30049 168 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ALDH5A1P51649 535 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 GEMIN4P57678 1058 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 ILF2Q12905 390 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 APOBEC3HQ6NTF7 200 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 EFCAB12Q6NXP0 572 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 SCN4BQ8IWT1 228 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 GPD1LQ8N335 351 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 RNF149Q8NC42 400 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 SYMPKQ92797 1274 aaKnown RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 KIF12Q96FN5 646 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 C12orf42Q96LP6 360 aa6.79□□□□□ -1.32
SMAD4-212ENST00000591126 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-212ENST00000591126 SHPRHQ149N8 1683 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 IGSF9BQ9UPX0 1349 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 AFPP02771 609 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 IFNAR2P48551 515 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PEX3P56589 373 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 IFFO1Q0D2I5 559 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 SLC39A14Q15043 492 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF699Q32M78 642 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 NELFBQ8WX92 580 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 MRFAP1L1Q96HT8 127 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 VPS50Q96JG6 964 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 MED15Q96RN5 788 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 MCCC1Q96RQ3 725 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 SEC62Q99442 399 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PLIN2Q99541 437 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 GPR20Q99678 358 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 LXNQ9BS40 222 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 POLR3CQ9BUI4 534 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 DCLK3Q9C098 648 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 HOMER3Q9NSC5 361 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 NFAT5O94916 1531 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF541Q9H0D2 1346 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 TLL1O43897 1013 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 SELPP16109 830 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 TCF7P36402 384 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 OR1G1P47890 313 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 RFX5P48382 616 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 LHX1P48742 406 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 SLC12A2P55011 1212 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 NLRP12P59046 1061 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 EMC2Q15006 297 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PUS10Q3MIT2 529 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 KIAA1755Q5JYT7 1200 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PPP1R14CQ8TAE6 165 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 TRPM4Q8TD43 1214 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 FAM149B1Q96BN6 582 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 HEXIM2Q96MH2 286 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 MAGEB5Q9BZ81 275 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 NCOA5Q9HCD5 579 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 KCNQ5Q9NR82 932 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 C10orf71Q711Q0 1435 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CALB1P05937 261 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CDK17Q00537 523 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 KLHL30Q0D2K2 578 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 UBE2SQ16763 222 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 KLHL40Q2TBA0 621 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CFAP157Q5JU67 520 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 UNC13DQ70J99 1090 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF365Q70YC5 407 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 TMEM35BQ8NCS4 154 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 TTC25Q96NG3 672 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 XPO6Q96QU8 1125 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 IFIH1Q9BYX4 1025 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 EMILIN3Q9NT22 766 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CTTNBP2NLQ9P2B4 639 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CTNND2Q9UQB3 1225 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 UMODL1Q5DID0 1318 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 BIN1O00499 593 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 IRF6O14896 467 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 MAP3K13O43283 966 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 ACTN4O43707 911 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF202O95125 648 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 AARSP49588 968 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 TAF6P49848 677 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 EPHB1P54762 984 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 KCNB1Q14721 858 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms