RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CBWD5Q5RIA9 395 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 MAEAQ7L5Y9 396 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 MICALL2Q8IY33 904 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 U2AF1L4Q8WU68 220 aaKnown RBP20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 RBM12Q9NTZ6 932 aaKnown RBP20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 VPS18Q9P253 973 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 SCAF8Q9UPN6 1271 aaKnown RBP20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 EXOC7Q9UPT5 735 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 DDX3XO00571 662 aaKnown RBP eCLIP20.84■□□□□ 0.933e-56■□□□□ 10
PRKCSH-209ENST00000589838 DKC1O60832 514 aaKnown RBP eCLIP20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 KIF4AO95239 1232 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 TRIM49P0CI25 452 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 TRIM49CP0CI26 452 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 CCND2P30279 289 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 GMPSP49915 693 aaPredicted RBP20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 EPHB4P54760 987 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 BACE1P56817 501 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 SPP2Q13103 211 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 EMBQ6PCB8 327 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 HAUS6Q7Z4H7 955 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 NLRX1Q86UT6 975 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 IFT20Q8IY31 132 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 SCYL3Q8IZE3 742 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 TPCN2Q8NHX9 752 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 SLC30A5Q8TAD4 765 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 MS4A14Q96JA4 679 aa20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 DMGDHQ9UI17 866 aaKnown RBP20.84■□□□□ 0.93
PRKCSH-209ENST00000589838 NFKBIEO00221 500 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 VAMP7P51809 220 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 OAZ1P54368 228 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 TNNC1P63316 161 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 NSMFQ6X4W1 530 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 LRRC57Q8N9N7 239 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 XXYLT1Q8NBI6 393 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 HVCN1Q96D96 273 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 INPP4AQ96PE3 977 aaPredicted RBP20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 PICK1Q9NRD5 415 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 EHD2Q9NZN4 543 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 CNOT7Q9UIV1 285 aaKnown RBP20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 ASTN2O75129 1339 aaPredicted RBP20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 PARP14Q460N5 1801 aa20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 BRCA1P38398 1863 aaKnown RBP20.83■□□□□ 0.92
PRKCSH-209ENST00000589838 EGFRP00533 1210 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 SMTNP53814 917 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 ZNF746Q6NUN9 644 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 RDH13Q8NBN7 331 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 GPRASP2Q96D09 838 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 SENP7Q9BQF6 1050 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 MAF1Q9H063 256 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 RNF146Q9NTX7 359 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 SMARCAL1Q9NZC9 954 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 ZNF112Q9UJU3 913 aa20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-209ENST00000589838 MYBL2P10244 700 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 TNFAIP3P21580 790 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 NCKAP1LP55160 1127 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 XKR9Q5GH70 373 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 NBPF12Q5TAG4 269 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 OTUD6AQ7L8S5 288 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 SLFN11Q7Z7L1 901 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 GOLGA6L1Q8N7Z2 621 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 ZNF280CQ8ND82 737 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 HDAC7Q8WUI4 952 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 ATG4CQ96DT6 458 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 SUCLA2Q9P2R7 463 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 FAN1Q9Y2M0 1017 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 LTBP3Q9NS15 1303 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 TESPA1A2RU30 521 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 KCNK3O14649 394 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 PMM2O15305 246 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 TMEM253P0C7T8 217 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 NNTQ13423 1086 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 TBC1D10BQ4KMP7 808 aaPredicted RBP20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 SAMD7Q7Z3H4 446 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 PEX26Q7Z412 305 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 VSIG10LQ86VR7 867 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 USP38Q8NB14 1042 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 ACTRT1Q8TDG2 376 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 CALR3Q96L12 384 aaKnown RBP20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 MOV10L1Q9BXT6 1211 aaKnown RBP20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 PCIF1Q9H4Z3 704 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 HSPBP1Q9NZL4 362 aa20.81■□□□□ 0.92
PRKCSH-209ENST00000589838 EMSYQ7Z589 1322 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 C19orf81C9J6K1 198 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 BACH1O14867 736 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 CLSTN1O94985 981 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 DNA2P51530 1060 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 GALCP54803 685 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 SLC7A5Q01650 507 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 DGKZQ13574 1117 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 BAATQ14032 418 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 KIF22Q14807 665 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 LNX1Q8TBB1 728 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 C12orf42Q96LP6 360 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 PACSIN2Q9UNF0 486 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 PCDHA10Q9Y5I2 948 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 GJA3Q9Y6H8 435 aa20.8■□□□□ 0.92
PRKCSH-209ENST00000589838 NCANO14594 1321 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 ATP9AO75110 1047 aa20.79■□□□□ 0.92
PRKCSH-209ENST00000589838 PEX3P56589 373 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms