RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ZNF174Q15697 407 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 KIAA0319LQ8IZA0 1049 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 APBB2Q92870 758 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 MAP7D2Q96T17 732 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 CELF4Q9BZC1 486 aaKnown RBP11.61□□□□□ -0.55
SDF2-208ENST00000589788 TTC12Q9H892 705 aaPredicted RBP11.61□□□□□ -0.55
SDF2-208ENST00000589788 IL21Q9HBE4 155 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 GINS2Q9Y248 185 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 PCDHA11Q9Y5I1 949 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 SIP14410 1827 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 MICAL3Q7RTP6 2002 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 LOXHD1Q8IVV2 1947 aa11.61□□□□□ -0.55
SDF2-208ENST00000589788 AMHP03971 560 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 CTHP32929 405 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 DEFB103AP81534 67 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 BECN1Q14457 450 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 LPIN1Q14693 890 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 FBXO47Q5MNV8 452 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 LARP1BQ659C4 914 aaKnown RBP11.6□□□□□ -0.55
SDF2-208ENST00000589788 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 TSHZ1Q6ZSZ6 1077 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 HERC6Q8IVU3 1022 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 HSCBQ8IWL3 235 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 MTMR9Q96QG7 549 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 OCSTAMPQ9BR26 566 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 NIFKQ9BYG3 293 aaKnown RBP11.6□□□□□ -0.55
SDF2-208ENST00000589788 OSBPL7Q9BZF2 842 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 SEMA6BQ9H3T3 888 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 ZNF576Q9H609 170 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 SUGCTQ9HAC7 445 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 SLC28A3Q9HAS3 691 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 MTMR10Q9NXD2 777 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 TMEM150BA6NC51 233 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 OR52Z1P0C646 297 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 DNM2P50570 870 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 CLCN3P51790 818 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 CYP4A11Q02928 519 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 SPIRE1Q08AE8 756 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 PAK2Q13177 524 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 CUL4AQ13619 759 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 CTTNQ14247 550 aaKnown RBP11.6□□□□□ -0.55
SDF2-208ENST00000589788 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 TPH2Q8IWU9 490 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 MYOCDQ8IZQ8 938 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 LRRC71Q8N4P6 559 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 NEK9Q8TD19 979 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 DYDC2Q96IM9 177 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 PPP1R16BQ96T49 567 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 LXNQ9BS40 222 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 TMEM60Q9H2L4 133 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 NKX2-4Q9H2Z4 354 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 ZSWIM4Q9H7M6 989 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 RGL1Q9NZL6 768 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 YBX2Q9Y2T7 364 aaKnown RBP11.6□□□□□ -0.55
SDF2-208ENST00000589788 SQORQ9Y6N5 450 aa11.6□□□□□ -0.55
SDF2-208ENST00000589788 KDM3AQ9Y4C1 1321 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 PTPRSQ13332 1948 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 K7ELQ4 463 aaPredicted RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 STBD1O95210 358 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 VTNP04004 478 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 MYOGP15173 224 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 PDCP20941 246 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 CD52P31358 61 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 TECP42680 631 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 TARBP2Q15633 366 aaKnown RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 KIZQ2M2Z5 673 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 TMEM266Q2M3C6 531 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 ODR4Q5SWX8 454 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 FAM117BQ6P1L5 589 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
SDF2-208ENST00000589788 ANO5Q75V66 913 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 TMCO2Q7Z6W1 182 aaPredicted RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 C4orf19Q8IY42 314 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 EXOC8Q8IYI6 725 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 ERMNQ8TAM6 284 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 CEP170P1Q96L14 293 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 SCLT1Q96NL6 688 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 EIF2AK1Q9BQI3 630 aaKnown RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 JPH2Q9BR39 696 aaPredicted RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 SH2D3AQ9BRG2 576 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 TTYH1Q9H313 450 aaPredicted RBP11.59□□□□□ -0.55
SDF2-208ENST00000589788 CYP26B1Q9NR63 512 aa11.59□□□□□ -0.55
SDF2-208ENST00000589788 VPS37CA5D8V6 355 aaPredicted RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 RBAK-RBAKDNI3L0D1 243 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 RPS6KA5O75582 802 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 CA3P07451 260 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 YWHABP31946 246 aaKnown RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 TOB1P50616 345 aaPredicted RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 CRYBB1P53674 252 aaPredicted RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 NPEPPSP55786 919 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 NLRP11P59045 1033 aaKnown RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 NFX1Q12986 1120 aaKnown RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms