RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 EXOC8Q8IYI6 725 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ASAP3Q8TDY4 903 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 KCNN1Q92952 543 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 KIFC3Q9BVG8 833 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 CFHR5Q9BXR6 569 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ARHGAP39Q9C0H5 1083 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
SMAD4-205ENST00000588745 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
SMAD4-205ENST00000588745 EXOC7Q9UPT5 735 aa12.53□□□□□ -0.4
SMAD4-205ENST00000588745 COL1A2P08123 1366 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 IGKV6-21A0A0C4DH24 114 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 PPFIA4O75335 1185 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 AKAP3O75969 853 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 ZNF286BP0CG31 522 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.41
SMAD4-205ENST00000588745 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
SMAD4-205ENST00000588745 SCP2P22307 547 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 GLRA2P23416 452 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 NAMPTP43490 491 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 SNRPFP62306 86 aaKnown RBP12.52□□□□□ -0.41
SMAD4-205ENST00000588745 MYBPC2Q14324 1141 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 FRMD5Q7Z6J6 570 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 C12orf56Q8IXR9 622 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 TMEM174Q8WUU8 243 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 JPH2Q9BR39 696 aaPredicted RBP12.52□□□□□ -0.41
SMAD4-205ENST00000588745 C16orf70Q9BSU1 422 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 MKNK1Q9BUB5 465 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 NDST4Q9H3R1 872 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 DMAC2Q9NW81 257 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 ARHGAP28Q9P2N2 729 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 TBX20Q9UMR3 447 aa12.52□□□□□ -0.41
SMAD4-205ENST00000588745 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
SMAD4-205ENST00000588745 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■□□□□ 10.8
SMAD4-205ENST00000588745 CASP4P49662 377 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 CCZ1BP86790 482 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
SMAD4-205ENST00000588745 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 DGKDQ16760 1214 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 ZNF484Q5JVG2 852 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 IER5Q5VY09 327 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 METTL14Q9HCE5 456 aaKnown RBP12.51□□□□□ -0.41
SMAD4-205ENST00000588745 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
SMAD4-205ENST00000588745 FAM184BQ9ULE4 1060 aa12.51□□□□□ -0.41
SMAD4-205ENST00000588745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMAD4-205ENST00000588745 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 A6NJR5 290 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 NRDCO43847 1150 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 MFAP3LO75121 409 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 C22orf31O95567 290 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 GYPCP04921 128 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 TPM1P09493 284 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 PSMC2P35998 433 aaKnown RBP12.5□□□□□ -0.41
SMAD4-205ENST00000588745 CYP2J2P51589 502 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 SP3Q02447 781 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 RBL2Q08999 1139 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 DRP2Q13474 957 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 CAPSQ13938 189 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 KIF22Q14807 665 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 SYCP1Q15431 976 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 FAM186BQ8IYM0 893 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 DEPTORQ8TB45 409 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 TRAPPC12Q8WVT3 735 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 RNPEPQ9H4A4 650 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 PYCARDQ9ULZ3 195 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
SMAD4-205ENST00000588745 LRRIQ4A6NIV6 560 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 TISP43B9A030 160 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 AKR1B15C9JRZ8 316 aaPredicted RBP12.49□□□□□ -0.41
SMAD4-205ENST00000588745 H3BRB1 525 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 DYNC1LI2O43237 492 aaPredicted RBP12.49□□□□□ -0.41
SMAD4-205ENST00000588745 EXOC3O60645 756 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 CYBAP13498 195 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 AKR1A1P14550 325 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 INSRRP14616 1297 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 CASP14P31944 242 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 MAP2K2P36507 400 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 FLT3LGP49771 235 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 PRKCZQ05513 592 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
SMAD4-205ENST00000588745 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 TAS1R3Q7RTX0 852 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms