RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 BMP2KQ9NSY1 1161 aaPredicted RBP15.41■□□□□ 0.06
HDAC5-208ENST00000588419 DACT1Q9NYF0 836 aa15.41■□□□□ 0.06
HDAC5-208ENST00000588419 SPG21Q9NZD8 308 aa15.41■□□□□ 0.06
HDAC5-208ENST00000588419 DDX25Q9UHL0 483 aaKnown RBP15.41■□□□□ 0.06
HDAC5-208ENST00000588419 KCNJ14Q9UNX9 436 aa15.41■□□□□ 0.06
HDAC5-208ENST00000588419 PIN4Q9Y237 131 aaKnown RBP15.41■□□□□ 0.06
HDAC5-208ENST00000588419 LZTS1Q9Y250 596 aa15.41■□□□□ 0.06
HDAC5-208ENST00000588419 MYO10Q9HD67 2058 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 TMEM221A6NGB7 291 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 M0R296 226 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 ZC3H11AO75152 810 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC5-208ENST00000588419 SFPQP23246 707 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC5-208ENST00000588419 DNM2P50570 870 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 SMC1AQ14683 1233 aaKnown RBP15.4■□□□□ 0.06
HDAC5-208ENST00000588419 CBX2Q14781 532 aaPredicted RBP15.4■□□□□ 0.06
HDAC5-208ENST00000588419 XKR3Q5GH77 459 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 ANKRD54Q6NXT1 300 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 TMEM87AQ8NBN3 555 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 PBXIP1Q96AQ6 731 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 MRPL9Q9BYD2 267 aaKnown RBP15.4■□□□□ 0.06
HDAC5-208ENST00000588419 GBP3Q9H0R5 595 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 ZSWIM6Q9HCJ5 1215 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 NGRNQ9NPE2 291 aaKnown RBP15.4■□□□□ 0.06
HDAC5-208ENST00000588419 CDH22Q9UJ99 828 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 C2orf16Q68DN1 1984 aa15.4■□□□□ 0.06
HDAC5-208ENST00000588419 A0A0U1RQF3 1178 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 SLC37A4O43826 429 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 ATF7P17544 494 aaPredicted RBP15.39■□□□□ 0.05
HDAC5-208ENST00000588419 BCAR1P56945 870 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 ZXDAP98168 799 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 NHLH1Q02575 133 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 TARBP2Q15633 366 aaKnown RBP15.39■□□□□ 0.05
HDAC5-208ENST00000588419 TRIM67Q6ZTA4 783 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 CATSPER4Q7RTX7 472 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 KSR1Q8IVT5 923 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 SUGP1Q8IWZ8 645 aaKnown RBP15.39■□□□□ 0.05
HDAC5-208ENST00000588419 SLC39A11Q8N1S5 342 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 ZNF710Q8N1W2 664 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 RDM1Q8NG50 284 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 TMEM169Q96HH4 297 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 PDRG1Q9NUG6 133 aa15.39■□□□□ 0.05
HDAC5-208ENST00000588419 SUCLA2Q9P2R7 463 aaPredicted RBP15.39■□□□□ 0.05
HDAC5-208ENST00000588419 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.38■□□□□ 0.05
HDAC5-208ENST00000588419 CCDC194A0A1B0GVG4 234 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 MARCH6O60337 910 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 PHKA2P46019 1235 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 ALDH7A1P49419 539 aaKnown RBP15.38■□□□□ 0.05
HDAC5-208ENST00000588419 EVCP57679 992 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 RNASELQ05823 741 aaKnown RBP15.38■□□□□ 0.05
HDAC5-208ENST00000588419 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 DAGLBQ8NCG7 672 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 AUTS2Q8WXX7 1259 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 CASP10Q92851 521 aa15.38■□□□□ 0.05
HDAC5-208ENST00000588419 NIFKQ9BYG3 293 aaKnown RBP15.38■□□□□ 0.05
HDAC5-208ENST00000588419 DENND4AQ7Z401 1863 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 EML1O00423 815 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 EOMESO95936 686 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 WEE2P0C1S8 567 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 MRE11P49959 708 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 POLGP54098 1239 aaPredicted RBP15.37■□□□□ 0.05
HDAC5-208ENST00000588419 PSMC5P62195 406 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
HDAC5-208ENST00000588419 SYCE2Q6PIF2 218 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 ZNF598Q86UK7 904 aaKnown RBP15.37■□□□□ 0.05
HDAC5-208ENST00000588419 SUSD6Q92537 303 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
HDAC5-208ENST00000588419 HCFC2Q9Y5Z7 792 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 PLXNA3P51805 1871 aa15.37■□□□□ 0.05
HDAC5-208ENST00000588419 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 C2orf71A6NGG8 1288 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 MEIS3P2A8K0S8 358 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 M0R2N6 131 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 CCNT1O60563 726 aaKnown RBP15.36■□□□□ 0.05
HDAC5-208ENST00000588419 CDKL5O76039 1030 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 STBD1O95210 358 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 CYP3A7P24462 503 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 NPEPPSP55786 919 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 SCRN1Q12765 414 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 NPY5RQ15761 445 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 TPRNQ4KMQ1 711 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 RARS2Q5T160 578 aaKnown RBP15.36■□□□□ 0.05
HDAC5-208ENST00000588419 NCAPH2Q6IBW4 605 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 CES5AQ6NT32 575 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 MOXD1Q6UVY6 613 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 GLB1LQ6UWU2 654 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 PIK3AP1Q6ZUJ8 805 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 ANO5Q75V66 913 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 ZNF410Q86VK4 478 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 TMEM173Q86WV6 379 aaPredicted RBP15.36■□□□□ 0.05
HDAC5-208ENST00000588419 VPS52Q8N1B4 723 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 CEP170P1Q96L14 293 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 INO80BQ9C086 356 aaPredicted RBP15.36■□□□□ 0.05
HDAC5-208ENST00000588419 S1PR5Q9H228 398 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 CHST12Q9NRB3 414 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 GJB4Q9NTQ9 266 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 FAM105AQ9NUU6 356 aa15.36■□□□□ 0.05
HDAC5-208ENST00000588419 IGKV6-21A0A0C4DH24 114 aa15.35■□□□□ 0.05
HDAC5-208ENST00000588419 CLASP2O75122 1294 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms