RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 GATMP50440 423 aa26.05■■□□□ 1.76
LSM7-204ENST00000587502 ECHDC2Q86YB7 292 aa26.05■■□□□ 1.76
LSM7-204ENST00000587502 ABI1Q8IZP0 508 aa26.05■■□□□ 1.76
LSM7-204ENST00000587502 RSPH1Q8WYR4 309 aa26.05■■□□□ 1.76
LSM7-204ENST00000587502 NLRP4Q96MN2 994 aa26.05■■□□□ 1.76
LSM7-204ENST00000587502 ANKEF1Q9NU02 776 aa26.05■■□□□ 1.76
LSM7-204ENST00000587502 BRWD1Q9NSI6 2320 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 TNFRSF10AO00220 468 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 KCNQ1P51787 676 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 TCEAL5Q5H9L2 206 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 NOSTRINQ8IVI9 506 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 ZNF579Q8NAF0 562 aaKnown RBP26.04■■□□□ 1.76
LSM7-204ENST00000587502 KLHL23Q8NBE8 558 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 PPP2R3CQ969Q6 453 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 TRAIPQ9BWF2 469 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 NOL7Q9UMY1 257 aaKnown RBP26.04■■□□□ 1.76
LSM7-204ENST00000587502 NCOR1O75376 2440 aa26.04■■□□□ 1.76
LSM7-204ENST00000587502 FNDC1Q4ZHG4 1894 aaPredicted RBP26.03■■□□□ 1.76
LSM7-204ENST00000587502 WNT7AO00755 349 aa26.03■■□□□ 1.76
LSM7-204ENST00000587502 CD2BP2O95400 341 aaKnown RBP26.03■■□□□ 1.76
LSM7-204ENST00000587502 XRCC6P12956 609 aaKnown RBP eCLIP26.03■■□□□ 1.76
LSM7-204ENST00000587502 FGFR4P22455 802 aa26.03■■□□□ 1.76
LSM7-204ENST00000587502 MCM2P49736 904 aa26.03■■□□□ 1.76
LSM7-204ENST00000587502 EMC2Q15006 297 aa26.03■■□□□ 1.76
LSM7-204ENST00000587502 PRPF31Q8WWY3 499 aaKnown RBP26.03■■□□□ 1.76
LSM7-204ENST00000587502 CCDC43Q96MW1 224 aaKnown RBP26.03■■□□□ 1.76
LSM7-204ENST00000587502 MTRQ99707 1265 aa26.03■■□□□ 1.76
LSM7-204ENST00000587502 ALG13Q9NP73 1137 aaKnown RBP26.03■■□□□ 1.76
LSM7-204ENST00000587502 CSDE1O75534 798 aaKnown RBP26.02■■□□□ 1.76
LSM7-204ENST00000587502 ITGB1P05556 798 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 FGFR1P11362 822 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 LAG3P18627 525 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 UBE3AQ05086 875 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 LEXMQ3ZCV2 418 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 CATSPER4Q7RTX7 472 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 SRGAP1Q7Z6B7 1085 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 KSR1Q8IVT5 923 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 SPPL3Q8TCT6 385 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 TMEM143Q96AN5 459 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 PABPC5Q96DU9 382 aaKnown RBP26.02■■□□□ 1.76
LSM7-204ENST00000587502 TMEM60Q9H2L4 133 aa26.02■■□□□ 1.76
LSM7-204ENST00000587502 TYW1Q9NV66 732 aaKnown RBP26.02■■□□□ 1.76
LSM7-204ENST00000587502 DGAT1O75907 488 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 OR52Z1P0C646 297 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 LAMTOR4Q0VGL1 99 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 MXD4Q14582 209 aaPredicted RBP26.01■■□□□ 1.75
LSM7-204ENST00000587502 PUS10Q3MIT2 529 aaKnown RBP26.01■■□□□ 1.75
LSM7-204ENST00000587502 TTC38Q5R3I4 469 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 TWF2Q6IBS0 349 aaKnown RBP26.01■■□□□ 1.75
LSM7-204ENST00000587502 LRRC43Q8N309 656 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 ERMNQ8TAM6 284 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 CASD1Q96PB1 797 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 IFT122Q9HBG6 1241 aa26.01■■□□□ 1.75
LSM7-204ENST00000587502 SRGAP2CP0DJJ0 459 aa26■■□□□ 1.75
LSM7-204ENST00000587502 KCNA5P22460 613 aa26■■□□□ 1.75
LSM7-204ENST00000587502 U2AF2P26368 475 aaKnown RBP eCLIP26■■□□□ 1.75
LSM7-204ENST00000587502 COL19A1Q14993 1142 aa26■■□□□ 1.75
LSM7-204ENST00000587502 PCBP1Q15365 356 aaKnown RBP eCLIP26■■□□□ 1.75
LSM7-204ENST00000587502 ZNF174Q15697 407 aa26■■□□□ 1.75
LSM7-204ENST00000587502 ZNF598Q86UK7 904 aaKnown RBP26■■□□□ 1.75
LSM7-204ENST00000587502 FERMT3Q86UX7 667 aa26■■□□□ 1.75
LSM7-204ENST00000587502 RNF169Q8NCN4 708 aa26■■□□□ 1.75
LSM7-204ENST00000587502 TUFT1Q9NNX1 390 aa26■■□□□ 1.75
LSM7-204ENST00000587502 PIN4Q9Y237 131 aaKnown RBP26■■□□□ 1.75
LSM7-204ENST00000587502 MYO7AQ13402 2215 aa26■■□□□ 1.75
LSM7-204ENST00000587502 POTEMA6NI47 508 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 ZBTB39O15060 712 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 PHKA2P46019 1235 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 RAB27AP51159 221 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 COLGALT1Q8NBJ5 622 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 POF1BQ8WVV4 589 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 MRPL9Q9BYD2 267 aaKnown RBP25.99■■□□□ 1.75
LSM7-204ENST00000587502 CWH43Q9H720 699 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 KIAA1671Q9BY89 1806 aa25.99■■□□□ 1.75
LSM7-204ENST00000587502 MUC3AQ02505 3323 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 TECP42680 631 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 RARRES1P49788 294 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 POU5F1BQ06416 359 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 TFDP1Q14186 410 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 THNSL1Q8IYQ7 743 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 RNF149Q8NC42 400 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 POLR3CQ9BUI4 534 aaPredicted RBP25.98■■□□□ 1.75
LSM7-204ENST00000587502 BMP2KQ9NSY1 1161 aaPredicted RBP25.98■■□□□ 1.75
LSM7-204ENST00000587502 AGPAT5Q9NUQ2 364 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 RNF19AQ9NV58 838 aa25.98■■□□□ 1.75
LSM7-204ENST00000587502 TCF20Q9UGU0 1960 aaKnown RBP25.98■■□□□ 1.75
LSM7-204ENST00000587502 CARNS1A5YM72 827 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 ZNF623O75123 536 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 PPM1AP35813 382 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 CAMK1Q14012 370 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 PDE12Q6L8Q7 609 aaKnown RBP25.97■■□□□ 1.75
LSM7-204ENST00000587502 TMX3Q96JJ7 454 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 NACC1Q96RE7 527 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 FAM105AQ9NUU6 356 aa25.97■■□□□ 1.75
LSM7-204ENST00000587502 PUF60Q9UHX1 559 aaKnown RBP25.97■■□□□ 1.75
LSM7-204ENST00000587502 FGF18O76093 207 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 MUTP22033 750 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 NCBP1Q09161 790 aaKnown RBP25.96■■□□□ 1.75
LSM7-204ENST00000587502 CLLU1OSQ5K130 101 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 EP400NLQ6ZTU2 488 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms