RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 ECHDC2Q86YB7 292 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 RNF169Q8NCN4 708 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 MTRQ99707 1265 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 ELAC1Q9H777 363 aaKnown RBP21.24■□□□□ 0.99
TPM4-204ENST00000586499 MINDY3Q9H8M7 445 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 ALG13Q9NP73 1137 aaKnown RBP21.24■□□□□ 0.99
TPM4-204ENST00000586499 RNF19AQ9NV58 838 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 GTF3C3Q9Y5Q9 886 aa21.24■□□□□ 0.99
TPM4-204ENST00000586499 CSPG5O95196 566 aa21.23■□□□□ 0.99
TPM4-204ENST00000586499 PTGDRQ13258 359 aa21.23■□□□□ 0.99
TPM4-204ENST00000586499 FERMT3Q86UX7 667 aa21.23■□□□□ 0.99
TPM4-204ENST00000586499 ATXN2LQ8WWM7 1075 aaKnown RBP21.23■□□□□ 0.99
TPM4-204ENST00000586499 TCP11Q8WWU5 503 aa21.23■□□□□ 0.99
TPM4-204ENST00000586499 C11orf84Q9BUA3 381 aaPredicted RBP21.23■□□□□ 0.99
TPM4-204ENST00000586499 RWDD3Q9Y3V2 267 aa21.23■□□□□ 0.99
TPM4-204ENST00000586499 FNDC1Q4ZHG4 1894 aaPredicted RBP21.23■□□□□ 0.99
TPM4-204ENST00000586499 KIAA1671Q9BY89 1806 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 H3BQV1 296 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 SFPQP23246 707 aaKnown RBP eCLIP21.22■□□□□ 0.99
TPM4-204ENST00000586499 PTPROQ16827 1216 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 POTEGQ6S5H5 508 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 CATSPER4Q7RTX7 472 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 RNF149Q8NC42 400 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 CCDC43Q96MW1 224 aaKnown RBP21.22■□□□□ 0.99
TPM4-204ENST00000586499 ASB2Q96Q27 587 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
TPM4-204ENST00000586499 INO80BQ9C086 356 aaPredicted RBP21.22■□□□□ 0.99
TPM4-204ENST00000586499 TUFT1Q9NNX1 390 aa21.22■□□□□ 0.99
TPM4-204ENST00000586499 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
TPM4-204ENST00000586499 PIN4Q9Y237 131 aaKnown RBP21.22■□□□□ 0.99
TPM4-204ENST00000586499 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.22■□□□□ 0.99
TPM4-204ENST00000586499 A0A0U1RQF3 1178 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 GAS2O43903 313 aaKnown RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 DGAT1O75907 488 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 ATF7P17544 494 aaPredicted RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 RPA1P27694 616 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 FXR2P51116 673 aaKnown RBP eCLIP21.21■□□□□ 0.992e-7■□□□□ 10.7
TPM4-204ENST00000586499 MRPS5P82675 430 aaKnown RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 IL17AQ16552 155 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 LONRF3Q496Y0 759 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 TJAP1Q5JTD0 557 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 SPOUT1Q5T280 376 aaKnown RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 LARP1BQ659C4 914 aaKnown RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 MAEAQ7L5Y9 396 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 ZNF598Q86UK7 904 aaKnown RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 KLHL23Q8NBE8 558 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 ASAP3Q8TDY4 903 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 CASD1Q96PB1 797 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 PLVAPQ9BX97 442 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 CHST12Q9NRB3 414 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 TYW1Q9NV66 732 aaKnown RBP21.21■□□□□ 0.99
TPM4-204ENST00000586499 PLAGL2Q9UPG8 496 aa21.21■□□□□ 0.99
TPM4-204ENST00000586499 ASAP2O43150 1006 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 USO1O60763 962 aaKnown RBP21.2■□□□□ 0.98
TPM4-204ENST00000586499 ITGB1P05556 798 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.98
TPM4-204ENST00000586499 ARL2P36404 184 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 CUL4AQ13619 759 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 ECM1Q16610 540 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 CLLU1OSQ5K130 101 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 TWF2Q6IBS0 349 aaKnown RBP21.2■□□□□ 0.98
TPM4-204ENST00000586499 LRRC55Q6ZSA7 311 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 ERMNQ8TAM6 284 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 HLA-CQ95604 372 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 NACC1Q96RE7 527 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.2■□□□□ 0.98
TPM4-204ENST00000586499 DACT1Q9NYF0 836 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 LRWD1Q9UFC0 647 aa21.2■□□□□ 0.98
TPM4-204ENST00000586499 DNAJB1P25685 340 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 PHKA2P46019 1235 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 KCNQ1P51787 676 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 CAMK1Q14012 370 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 TCEAL5Q5H9L2 206 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 SRGAP1Q7Z6B7 1085 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 LPPQ93052 612 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 P2RX5Q93086 422 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 TMEM117Q9H0C3 514 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 CWH43Q9H720 699 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 GPRC5CQ9NQ84 441 aa21.19■□□□□ 0.98
TPM4-204ENST00000586499 MEIS3P2A8K0S8 358 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 PP2D1A8MPX8 630 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 EOMESO95936 686 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 GLRA2P23416 452 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 CCT6AP40227 531 aaKnown RBP21.18■□□□□ 0.98
TPM4-204ENST00000586499 PTENP60484 403 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 CAPSQ13938 189 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 MXD4Q14582 209 aaPredicted RBP21.18■□□□□ 0.98
TPM4-204ENST00000586499 IGSF22Q8N9C0 903 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 SPPL3Q8TCT6 385 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 HELQQ8TDG4 1101 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 AGPAT5Q9NUQ2 364 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 DBR1Q9UK59 544 aaKnown RBP21.18■□□□□ 0.98
TPM4-204ENST00000586499 COG5Q9UP83 839 aa21.18■□□□□ 0.98
TPM4-204ENST00000586499 MYO7AQ13402 2215 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 CDC25AP30304 524 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 HOXA11P31270 313 aaPredicted RBP21.17■□□□□ 0.98
TPM4-204ENST00000586499 PDIA5Q14554 519 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 TIGD5Q53EQ6 642 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 RILPL1Q5EBL4 403 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 ABI1Q8IZP0 508 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms