RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 EMC2Q15006 297 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 ZNF174Q15697 407 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 SPOUT1Q5T280 376 aaKnown RBP23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 NOSTRINQ8IVI9 506 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 SPPL3Q8TCT6 385 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 UPF2Q9HAU5 1272 aaKnown RBP23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 IFT122Q9HBG6 1241 aa23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 TYW1Q9NV66 732 aaKnown RBP23.96■■□□□ 1.43
PPP4R1-228ENST00000584074 A0A0U1RQF3 1178 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 LYPLA2O95372 231 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 CD2BP2O95400 341 aaKnown RBP23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 SRGAP2CP0DJJ0 459 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 KCNA5P22460 613 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 LAMTOR4Q0VGL1 99 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 GNL2Q13823 731 aaKnown RBP23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 NAALADL2Q58DX5 795 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 NEK9Q8TD19 979 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 PSPC1Q8WXF1 523 aaKnown RBP23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 CASD1Q96PB1 797 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 INO80BQ9C086 356 aaPredicted RBP23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 TMEM117Q9H0C3 514 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 DACT1Q9NYF0 836 aa23.95■■□□□ 1.42
PPP4R1-228ENST00000584074 A0A087WWV3 80 aa23.94■■□□□ 1.42
PPP4R1-228ENST00000584074 CATSPER4Q7RTX7 472 aa23.94■■□□□ 1.42
PPP4R1-228ENST00000584074 CHST12Q9NRB3 414 aa23.94■■□□□ 1.42
PPP4R1-228ENST00000584074 PIN4Q9Y237 131 aaKnown RBP23.94■■□□□ 1.42
PPP4R1-228ENST00000584074 PCDHB12Q9Y5F1 795 aa23.94■■□□□ 1.42
PPP4R1-228ENST00000584074 TNFRSF10AO00220 468 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 HOXA2O43364 376 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 ATF7P17544 494 aaPredicted RBP23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 CLLU1OSQ5K130 101 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 TTC38Q5R3I4 469 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 LRRC55Q6ZSA7 311 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 ZNF598Q86UK7 904 aaKnown RBP23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 PIGOQ8TEQ8 1089 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 TCP11Q8WWU5 503 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 CWH43Q9H720 699 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 MINDY3Q9H8M7 445 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 XPNPEP1Q9NQW7 623 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 AAASQ9NRG9 546 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 ANKEF1Q9NU02 776 aa23.93■■□□□ 1.42
PPP4R1-228ENST00000584074 KIAA1671Q9BY89 1806 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 GAS2O43903 313 aaKnown RBP23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 EOMESO95936 686 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 OR52Z1P0C646 297 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 SPATA31C1P0DKV0 1188 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 TECP42680 631 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 HYAL1Q12794 435 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 NBR1Q14596 966 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 COL19A1Q14993 1142 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 TWF2Q6IBS0 349 aaKnown RBP23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 EP400NLQ6ZTU2 488 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 FERMT3Q86UX7 667 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 ABI1Q8IZP0 508 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 COLGALT1Q8NBJ5 622 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 POF1BQ8WVV4 589 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 TMX3Q96JJ7 454 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 MTRQ99707 1265 aa23.92■■□□□ 1.42
PPP4R1-228ENST00000584074 U2AF2P26368 475 aaKnown RBP eCLIP23.91■■□□□ 1.421e-7■■■■□ 23.2
PPP4R1-228ENST00000584074 IRS1P35568 1242 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 PHKA2P46019 1235 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 ORC2Q13416 577 aaPredicted RBP23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 LEXMQ3ZCV2 418 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 CATSPER3Q86XQ3 398 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 RNF149Q8NC42 400 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 HELQQ8TDG4 1101 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 PABPC5Q96DU9 382 aaKnown RBP23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 TBC1D32Q96NH3 1257 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 TRAIPQ9BWF2 469 aa23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 FNDC1Q4ZHG4 1894 aaPredicted RBP23.91■■□□□ 1.42
PPP4R1-228ENST00000584074 H3BQ06 376 aaPredicted RBP23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 ASAP2O43150 1006 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 MED24O75448 989 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 FGF18O76093 207 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 GTF2F1P35269 517 aaKnown RBP eCLIP23.9■■□□□ 1.428e-7■■□□□ 14.3
PPP4R1-228ENST00000584074 TRAPPC10P48553 1259 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 RARRES1P49788 294 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 LONRF3Q496Y0 759 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 SRGAP1Q7Z6B7 1085 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 CCDC43Q96MW1 224 aaKnown RBP23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 AGPAT5Q9NUQ2 364 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 CLDND1Q9NY35 253 aa23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 NOL7Q9UMY1 257 aaKnown RBP23.9■■□□□ 1.42
PPP4R1-228ENST00000584074 DGAT1O75907 488 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 LAG3P18627 525 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 TOB1P50616 345 aaPredicted RBP23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 THNSL1Q8IYQ7 743 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 LRRC43Q8N309 656 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 C4orf32Q8N8J7 132 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 LPPQ93052 612 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 IGFLR1Q9H665 355 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 TUFT1Q9NNX1 390 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 PCDHGC5Q9Y5F6 944 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 BDP1A6H8Y1 2624 aa23.89■■□□□ 1.41
PPP4R1-228ENST00000584074 XRCC6P12956 609 aaKnown RBP eCLIP23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 PBX3P40426 434 aa23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 MXD4Q14582 209 aaPredicted RBP23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 CTC1Q2NKJ3 1217 aa23.88■■□□□ 1.41
PPP4R1-228ENST00000584074 ADGRD2Q7Z7M1 963 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms