RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 DISC1Q9NRI5 854 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 GABBR1Q9UBS5 961 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 CHD7Q9P2D1 2997 aa10.66□□□□□ -0.7
NPLOC4-219ENST00000576713 MROH7Q68CQ1 1323 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 WDR64B1ANS9 1081 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 H3BQV1 296 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 BACH1O14867 736 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 ZBTB39O15060 712 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 TBX3O15119 743 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 AXIN1O15169 862 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 TIMP1P01033 207 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 INSRRP14616 1297 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 TXKP42681 527 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 CCL23P55773 120 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 IGBP1P78318 339 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 PTPN11Q06124 597 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 CLN3Q13286 438 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 PPP2R5CQ13362 524 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 MBTPS1Q14703 1052 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 CALCRLQ16602 461 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 TCTN1Q2MV58 587 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 PLPPR4Q7Z2D5 763 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 SERINC5Q86VE9 423 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 SMAP1Q8IYB5 467 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 FAM20AQ96MK3 541 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 SH2D3AQ9BRG2 576 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 SMARCAD1Q9H4L7 1026 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 ZNF302Q9NR11 478 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 ERAP1Q9NZ08 941 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 RGL1Q9NZL6 768 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 PCDHA10Q9Y5I2 948 aa10.65□□□□□ -0.7
NPLOC4-219ENST00000576713 TANC1Q9C0D5 1861 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 A0A087WWV3 80 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 C17orf102A2RUQ5 167 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 CARNS1A5YM72 827 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 PSAPP07602 524 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 CSF2RAP15509 400 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 PRKCEQ02156 737 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 PPFIA1Q13136 1202 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 GNL2Q13823 731 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 GRIK4Q16099 956 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 C9orf50Q5SZB4 431 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 MIS18BP1Q6P0N0 1132 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 MIER3Q7Z3K6 550 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 LINC00528Q8N1L1 170 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 DYDC2Q96IM9 177 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 HIPK3Q9H422 1215 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 TTC12Q9H892 705 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 ZNF215Q9UL58 517 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 KIF3AQ9Y496 699 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 SAMM50Q9Y512 469 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
NPLOC4-219ENST00000576713 SIP14410 1827 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 MBLAC1A4D2B0 266 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 PP2D1A8MPX8 630 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 TLR3O15455 904 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 SPINT1O43278 529 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 STX6O43752 255 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 OR52Z1P0C646 297 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 ACRP10323 421 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 CKBP12277 381 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 RAG1P15918 1043 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 TRAPPC10P48553 1259 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 CYP4A11Q02928 519 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 GRIN1Q05586 938 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 CTTNQ14247 550 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 ZNF618Q5T7W0 954 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 MFSD5Q6N075 450 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 ANO5Q75V66 913 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 ATP8B4Q8TF62 1192 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 FOXD4L4Q8WXT5 416 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 ATP6V0A1Q93050 837 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 CHAMP1Q96JM3 812 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 NAP1L4Q99733 375 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 AZI2Q9H6S1 392 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 SERTAD1Q9UHV2 236 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 PCDHA12Q9UN75 941 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
NPLOC4-219ENST00000576713 REV3LO60673 3130 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 WDR81Q562E7 1941 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 NRCAMQ92823 1304 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 SCN5AQ14524 2016 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 MEN1O00255 615 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 MED24O75448 989 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 SLITRK3O94933 977 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 UPP2O95045 317 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 C22orf31O95567 290 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 SPATA31C1P0DKV0 1188 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 SFNP31947 248 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 TECP42680 631 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 JAK3P52333 1124 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 PDE4CQ08493 712 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 RBL2Q08999 1139 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms