RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 GPC3P51654 580 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 NPEPPSP55786 919 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 LSM11P83369 360 aaKnown RBP eCLIP10.15□□□□□ -0.78
NDE1-207ENST00000573203 CDC42EP1Q00587 391 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 CYP4A11Q02928 519 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 BTG3Q14201 252 aaPredicted RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 CTTNQ14247 550 aaKnown RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 EPC2Q52LR7 807 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 OTUD6AQ7L8S5 288 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 TPH2Q8IWU9 490 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 C4orf19Q8IY42 314 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 TMEM192Q8IY95 271 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 EXOC8Q8IYI6 725 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 CEP170P1Q96L14 293 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 CEP89Q96ST8 783 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 ADAM2Q99965 735 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 ZSWIM4Q9H7M6 989 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 TTC12Q9H892 705 aaPredicted RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 CYP26B1Q9NR63 512 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 C1orf112Q9NSG2 853 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 SUCLA2Q9P2R7 463 aaPredicted RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 WRAP73Q9P2S5 460 aaPredicted RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 KIF3AQ9Y496 699 aa10.15□□□□□ -0.78
NDE1-207ENST00000573203 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.15□□□□□ -0.78
NDE1-207ENST00000573203 IGKV6-21A0A0C4DH24 114 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 MAFO75444 373 aaPredicted RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 DGKIO75912 1065 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 DARSP14868 501 aaKnown RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 EIF4BP23588 611 aaKnown RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 YWHABP31946 246 aaKnown RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 CTNNB1P35222 781 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 POLGP54098 1239 aaPredicted RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 DRP2Q13474 957 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 GPM6BQ13491 265 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 NBR1Q14596 966 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 ZNF174Q15697 407 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 E2F4Q16254 413 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 PAN2Q504Q3 1202 aaKnown RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 RHPN2Q8IUC4 686 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 NOSTRINQ8IVI9 506 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 SLC7A3Q8WY07 619 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 ZNF689Q96CS4 500 aaPredicted RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 MTMR9Q96QG7 549 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 GCOM2Q9BZD3 368 aaPredicted RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 TMEM60Q9H2L4 133 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 RC3H2Q9HBD1 1191 aaKnown RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 RGS18Q9NS28 235 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 LMCD1Q9NZU5 365 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 THEGQ9P2T0 379 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 NOL7Q9UMY1 257 aaKnown RBP10.14□□□□□ -0.79
NDE1-207ENST00000573203 RWDD3Q9Y3V2 267 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 PPME1Q9Y570 386 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 PCDHB7Q9Y5E2 793 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 KIAA1671Q9BY89 1806 aa10.14□□□□□ -0.79
NDE1-207ENST00000573203 FNDC1Q4ZHG4 1894 aaPredicted RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 A0A087WZ62 844 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 DLL1O00548 723 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 SLITRK3O94933 977 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 ZSCAN20P17040 1043 aaPredicted RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 FGFR4P22455 802 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 RFC5P40937 340 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 PTPROQ16827 1216 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 SKOR2Q2VWA4 1001 aaPredicted RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 XKR9Q5GH70 373 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 TTC38Q5R3I4 469 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 CMTR2Q8IYT2 770 aaKnown RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 CRIPAKQ8N1N5 446 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 NEK9Q8TD19 979 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 NLRP4Q96MN2 994 aa10.13□□□□□ -0.79
NDE1-207ENST00000573203 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 FDXACB1Q9BRP7 624 aaPredicted RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 INO80BQ9C086 356 aaPredicted RBP10.13□□□□□ -0.79
NDE1-207ENST00000573203 C9IYK1 514 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 H3BNC9 293 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 ZBTB39O15060 712 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 GAS2O43903 313 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 RB1P06400 928 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 OR52Z1P0C646 297 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.79
NDE1-207ENST00000573203 GJB2P29033 226 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 BMPR1AP36894 532 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 TECP42680 631 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 TRAPPC10P48553 1259 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 GATMP50440 423 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 MMRN1Q13201 1228 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 DSC3Q14574 896 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 SPOUT1Q5T280 376 aaKnown RBP10.12□□□□□ -0.79
NDE1-207ENST00000573203 MCTP1Q6DN14 999 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 ZNF410Q86VK4 478 aa10.12□□□□□ -0.79
NDE1-207ENST00000573203 ATXN2LQ8WWM7 1075 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms