RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZNF571Q7Z3V5 609 aaPredicted RBP19.78■□□□□ 0.76
SMPD3-211ENST00000568373 RDH13Q8NBN7 331 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 CEP170P1Q96L14 293 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 NOX5Q96PH1 765 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 CBWD1Q9BRT8 395 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 ANKZF1Q9H8Y5 726 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 ARID2Q68CP9 1835 aa19.78■□□□□ 0.76
SMPD3-211ENST00000568373 KRT13P13646 458 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 ANXA13P27216 316 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 ACTR2P61160 394 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 MYL7Q01449 175 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 CKAP4Q07065 602 aaKnown RBP19.77■□□□□ 0.76
SMPD3-211ENST00000568373 DMP1Q13316 513 aaPredicted RBP19.77■□□□□ 0.76
SMPD3-211ENST00000568373 SWSAP1Q6NVH7 229 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 ANKRD35Q8N283 1001 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 MSANTD4Q8NCY6 345 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 PCIF1Q9H4Z3 704 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 SNX12Q9UMY4 172 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 PFASO15067 1338 aa19.77■□□□□ 0.76
SMPD3-211ENST00000568373 ZRANB2O95218 330 aaKnown RBP eCLIP19.77■□□□□ 0.75
SMPD3-211ENST00000568373 IREB2P48200 963 aaKnown RBP19.77■□□□□ 0.75
SMPD3-211ENST00000568373 SMTNP53814 917 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 STXBP2Q15833 593 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 C10orf76Q5T2E6 689 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 ABHD15Q6UXT9 468 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 CCDC60Q8IWA6 550 aaPredicted RBP19.77■□□□□ 0.75
SMPD3-211ENST00000568373 XXYLT1Q8NBI6 393 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 TMEM161BQ8NDZ6 487 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 KIFAP3Q92845 792 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 HSPBP1Q9NZL4 362 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 BTBD7Q9P203 1132 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 FBXO40Q9UH90 709 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 TELO2Q9Y4R8 837 aa19.77■□□□□ 0.75
SMPD3-211ENST00000568373 EIF3JO75822 258 aaKnown RBP19.76■□□□□ 0.75
SMPD3-211ENST00000568373 NPTX2P47972 431 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 SP4Q02446 784 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 NAB2Q15742 525 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 RIOX2Q8IUF8 465 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 NOA1Q8NC60 698 aaKnown RBP19.76■□□□□ 0.75
SMPD3-211ENST00000568373 HVCN1Q96D96 273 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 MMS19Q96T76 1030 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 INTS2Q9H0H0 1204 aaKnown RBP19.76■□□□□ 0.75
SMPD3-211ENST00000568373 C17orf75Q9HAS0 396 aa19.76■□□□□ 0.75
SMPD3-211ENST00000568373 CCDC169A6NNP5 214 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 MAPK13O15264 365 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 PRLRP16471 622 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 FERP16591 822 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 ICAM3P32942 547 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 STAT1P42224 750 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 CBX1P83916 185 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 CNTN2Q02246 1040 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 KIAA0753Q2KHM9 967 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 MIS18BP1Q6P0N0 1132 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 GADL1Q6ZQY3 521 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 RPGRIP1Q96KN7 1286 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 CAPZA3Q96KX2 299 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 STK33Q9BYT3 514 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 TBX20Q9UMR3 447 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 EXOC7Q9UPT5 735 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 DAAM1Q9Y4D1 1078 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 A0A0G2JLL6 359 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 CCDC151A5D8V7 595 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 IRF6O14896 467 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 BUB1O43683 1085 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 PEX10O60683 326 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 VAMP7P51809 220 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 PRKCEQ02156 737 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 PPATQ06203 517 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 BMS1Q14692 1282 aaKnown RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 CC2D1AQ6P1N0 951 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 PRRT2Q7Z6L0 340 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 MAP4K3Q8IVH8 894 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 PROCA1Q8NCQ7 364 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 SPIRE2Q8WWL2 714 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 NTPCRQ9BSD7 190 aaKnown RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 ELP3Q9H9T3 547 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 FAM53CQ9NYF3 392 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 APEX2Q9UBZ4 518 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 RAB21Q9UL25 225 aa19.75■□□□□ 0.75
SMPD3-211ENST00000568373 MYH9P35579 1960 aaKnown RBP19.75■□□□□ 0.75
SMPD3-211ENST00000568373 F8VZ95 297 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 ZNF185O15231 689 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 DGAT1O75907 488 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 SUPT20HL2P0C7V6 817 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 KLRC1P26715 233 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 DLG4P78352 724 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 SP2Q02086 613 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 BRD3Q15059 726 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 MCPH1Q8NEM0 835 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 OTUD5Q96G74 571 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 KIFC3Q9BVG8 833 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 PACSIN1Q9BY11 444 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 KMT5AQ9NQR1 393 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 PDLIM7Q9NR12 457 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 SEPT9Q9UHD8 586 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-211ENST00000568373 DNAJC12Q9UKB3 198 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 IGSF9BQ9UPX0 1349 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 SOX5P35711 763 aa19.74■□□□□ 0.75
SMPD3-211ENST00000568373 ALDH5A1P51649 535 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-211ENST00000568373 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms