RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-223ENST00000564343 CWC22Q9HCG8 908 aaKnown RBP6.35□□□□□ -1.39
TCF4-223ENST00000564343 HMG20BQ9P0W2 317 aa6.35□□□□□ -1.39
TCF4-223ENST00000564343 MORF4L1Q9UBU8 362 aa6.35□□□□□ -1.39
TCF4-223ENST00000564343 CUL9Q8IWT3 2517 aa6.35□□□□□ -1.39
TCF4-223ENST00000564343 SMCHD1A6NHR9 2005 aa6.35□□□□□ -1.39
TCF4-223ENST00000564343 NPIPB6E9PJ23 425 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 RGS13O14921 159 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 GARTP22102 1010 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 CCND3P30281 292 aaPredicted RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 HOXA7P31268 230 aaPredicted RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 TRHRP34981 398 aaPredicted RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 CACNB2Q08289 660 aaPredicted RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 PABPC4Q13310 644 aaKnown RBP eCLIP6.34□□□□□ -1.39
TCF4-223ENST00000564343 ALDH1L2Q3SY69 923 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 ATG14Q6ZNE5 492 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 ANKS4BQ8N8V4 417 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 USP6NLQ92738 828 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.34□□□□□ -1.39
TCF4-223ENST00000564343 PORCNQ9H237 461 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 DNAJC18Q9H819 358 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 SMC4Q9NTJ3 1288 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 RBPJLQ9UBG7 517 aa6.34□□□□□ -1.39
TCF4-223ENST00000564343 NOB1Q9ULX3 412 aaKnown RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 SUPT16HQ9Y5B9 1047 aaKnown RBP6.34□□□□□ -1.39
TCF4-223ENST00000564343 ETV2O00321 342 aaPredicted RBP6.33□□□□□ -1.4
TCF4-223ENST00000564343 ZSCAN22P10073 491 aaPredicted RBP6.33□□□□□ -1.4
TCF4-223ENST00000564343 RAG1P15918 1043 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 MCAMP43121 646 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 BACE1P56817 501 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 HERVK_113P62684 666 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 IRX3P78415 501 aaPredicted RBP6.33□□□□□ -1.4
TCF4-223ENST00000564343 TEKQ02763 1124 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 MVPQ14764 893 aaKnown RBP6.33□□□□□ -1.4
TCF4-223ENST00000564343 KCNA10Q16322 511 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 ERMP1Q7Z2K6 904 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 GPR142Q7Z601 462 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 ADGRA1Q86SQ6 560 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 TEX11Q8IYF3 940 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 SPATA5Q8NB90 893 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 GPRC5AQ8NFJ5 357 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 SOCS4Q8WXH5 440 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 NEUROD6Q96NK8 337 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 GUCD1Q96NT3 240 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 SP110Q9HB58 689 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 AS3MTQ9HBK9 375 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 KBTBD4Q9NVX7 518 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 RAI14Q9P0K7 980 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 PI4KBQ9UBF8 816 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 HERC5Q9UII4 1024 aaKnown RBP6.33□□□□□ -1.4
TCF4-223ENST00000564343 MYH8P13535 1937 aa6.33□□□□□ -1.4
TCF4-223ENST00000564343 COL11A1P12107 1806 aaPredicted RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 PARP14Q460N5 1801 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 TLR3O15455 904 aaKnown RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 SRGAP3O43295 1099 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 MAP4K4O95819 1239 aaPredicted RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 LDHCP07864 332 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 ASNSP08243 561 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 ZKSCAN1P17029 563 aaPredicted RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 EIF4A3P38919 411 aaKnown RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 GSTO1P78417 241 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 TAGLNQ01995 201 aaKnown RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 NMIQ13287 307 aaPredicted RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 LILRA6Q6PI73 481 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 RNF111Q6ZNA4 994 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 METTL16Q86W50 562 aaKnown RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 TRMT2AQ8IZ69 625 aaKnown RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 FBXO27Q8NI29 283 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 SYTL5Q8TDW5 730 aaPredicted RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 TGFBRAP1Q8WUH2 860 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 SENP6Q9GZR1 1112 aaPredicted RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 CD320Q9NPF0 282 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 AATFQ9NY61 560 aaKnown RBP eCLIP6.32□□□□□ -1.4
TCF4-223ENST00000564343 TMOD4Q9NZQ9 345 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 FLRT1Q9NZU1 646 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 PALD1Q9ULE6 856 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 YBX2Q9Y2T7 364 aaKnown RBP6.32□□□□□ -1.4
TCF4-223ENST00000564343 PLXNA1Q9UIW2 1896 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 REV3LO60673 3130 aa6.32□□□□□ -1.4
TCF4-223ENST00000564343 FLT1P17948 1338 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 PNMA6EA0A0J9YXQ4 647 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 SHISA3A0PJX4 238 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 C19orf81C9J6K1 198 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 GREM1O60565 184 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 DNAJA2O60884 412 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 CNMDO75829 334 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 ATE1O95260 518 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 MAPK4P31152 587 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 RAD51AP2Q09MP3 1159 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 MTX1Q13505 466 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 ARSHQ5FYA8 562 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 GORABQ5T7V8 394 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 FBXL19Q6PCT2 694 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 PLEKHH3Q7Z736 793 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
TCF4-223ENST00000564343 DAGLBQ8NCG7 672 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms