RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LMBRD1Q9NUN5 540 aa7.73□□□□□ -1.17
SPG11-224ENST00000561268 WRAP73Q9P2S5 460 aaPredicted RBP7.73□□□□□ -1.17
SPG11-224ENST00000561268 ORC3Q9UBD5 711 aaPredicted RBP7.73□□□□□ -1.17
SPG11-224ENST00000561268 DDX25Q9UHL0 483 aaKnown RBP7.73□□□□□ -1.17
SPG11-224ENST00000561268 MTUS1Q9ULD2 1270 aa7.73□□□□□ -1.17
SPG11-224ENST00000561268 KCNJ14Q9UNX9 436 aa7.73□□□□□ -1.17
SPG11-224ENST00000561268 MRPL42Q9Y6G3 142 aaKnown RBP7.73□□□□□ -1.17
SPG11-224ENST00000561268 C5orf42Q9H799 3197 aa7.73□□□□□ -1.17
SPG11-224ENST00000561268 MYO10Q9HD67 2058 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 TNFRSF10AO00220 468 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 EML1O00423 815 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 WNT7AO00755 349 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 RPS6KA5O75582 802 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 UPP2O95045 317 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 CD2BP2O95400 341 aaKnown RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 VTNP04004 478 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 TPM2P07951 284 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 STAG3L1P0CL83 205 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 DARSP14868 501 aaKnown RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 XBP1P17861 261 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 EIF4BP23588 611 aaKnown RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 CTNNB1P35222 781 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 DRP2Q13474 957 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 GPM6BQ13491 265 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 PTPROQ16827 1216 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 KIZQ2M2Z5 673 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 TMEM266Q2M3C6 531 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 LEXMQ3ZCV2 418 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 SLC24A5Q71RS6 500 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 ANO5Q75V66 913 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 MIER3Q7Z3K6 550 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 ZNF598Q86UK7 904 aaKnown RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 ZNF410Q86VK4 478 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 ZSCAN30Q86W11 494 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 C4orf19Q8IY42 314 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 MICALL1Q8N3F8 863 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 BANK1Q8NDB2 785 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 PPM1EQ8WY54 764 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 RSPH1Q8WYR4 309 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 WASF1Q92558 559 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 GJA10Q969M2 543 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 MAP7D2Q96T17 732 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 UHRF1Q96T88 793 aaPredicted RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 NAP1L4Q99733 375 aaKnown RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 DHX33Q9H6R0 707 aaKnown RBP7.72□□□□□ -1.17
SPG11-224ENST00000561268 TMEM161AQ9NX61 479 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 ST3GAL5Q9UNP4 418 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 ATP6V1DQ9Y5K8 247 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 TSC2P49815 1807 aa7.72□□□□□ -1.17
SPG11-224ENST00000561268 CCDC194A0A1B0GVG4 234 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 GPR182O15218 404 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 GRM6O15303 877 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 CHMP2AO43633 222 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 GAS2O43903 313 aaKnown RBP7.71□□□□□ -1.18
SPG11-224ENST00000561268 TBX10O75333 385 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 MAFO75444 373 aaPredicted RBP7.71□□□□□ -1.18
SPG11-224ENST00000561268 LYPLA2O95372 231 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 ITGB1P05556 798 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 KRT2P35908 639 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 LTBRP36941 435 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 NASPP49321 788 aaPredicted RBP7.71□□□□□ -1.18
SPG11-224ENST00000561268 GATMP50440 423 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 NLRP11P59045 1033 aaKnown RBP7.71□□□□□ -1.18
SPG11-224ENST00000561268 PSMC5P62195 406 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 UBE3AQ05086 875 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 TBC1D8BQ0IIM8 1120 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 NR5A1Q13285 461 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 BTG3Q14201 252 aaPredicted RBP7.71□□□□□ -1.18
SPG11-224ENST00000561268 CSPP1Q1MSJ5 1256 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 LETM2Q2VYF4 491 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 UVSSAQ2YD98 709 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 TCEAL5Q5H9L2 206 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 EFCAB12Q6NXP0 572 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 CKAP2LQ8IYA6 745 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 LRRC71Q8N4P6 559 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 UIMC1Q96RL1 719 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 ADAM2Q99965 735 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 SAMM50Q9Y512 469 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 DOCK6Q96HP0 2047 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 ZMYM2Q9UBW7 1377 aa7.71□□□□□ -1.18
SPG11-224ENST00000561268 TMEM150BA6NC51 233 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 FSCN2O14926 492 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 ZNF500O60304 480 aaPredicted RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 JAK2O60674 1132 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 DKC1O60832 514 aaKnown RBP eCLIP7.7□□□□□ -1.18
SPG11-224ENST00000561268 DNAJB1P25685 340 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 TMOD1P28289 359 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 QARSP47897 775 aaKnown RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 CDC42EP1Q00587 391 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 HYAL1Q12794 435 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 ORC2Q13416 577 aaPredicted RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 KCNC3Q14003 757 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 EPHA7Q15375 998 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 CLLU1OSQ5K130 101 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 LRSAM1Q6UWE0 723 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 PIK3AP1Q6ZUJ8 805 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 ECHDC2Q86YB7 292 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 SLFN12Q8IYM2 578 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 LRRC43Q8N309 656 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 NECAB1Q8N987 351 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms