RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 A8MXQ7 604 aa18.65■□□□□ 0.58
PTPN21-208ENST00000556564 GBP1P32455 592 aa18.65■□□□□ 0.58
PTPN21-208ENST00000556564 EFCAB12Q6NXP0 572 aa18.65■□□□□ 0.58
PTPN21-208ENST00000556564 IL25Q9H293 177 aa18.65■□□□□ 0.58
PTPN21-208ENST00000556564 YWHAGP61981 247 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTPN21-208ENST00000556564 PROM2Q8N271 834 aa18.65■□□□□ 0.58
PTPN21-208ENST00000556564 INTS2Q9H0H0 1204 aaKnown RBP18.65■□□□□ 0.58
PTPN21-208ENST00000556564 PASKQ96RG2 1323 aa18.65■□□□□ 0.58
PTPN21-208ENST00000556564 VCAM1P19320 739 aa18.64■□□□□ 0.58
PTPN21-208ENST00000556564 C1orf228Q6PIY5 440 aa18.64■□□□□ 0.58
PTPN21-208ENST00000556564 SCFD2Q8WU76 684 aa18.64■□□□□ 0.58
PTPN21-208ENST00000556564 TCF7P36402 384 aaPredicted RBP18.64■□□□□ 0.57
PTPN21-208ENST00000556564 ARHGEF18Q6ZSZ5 1173 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 VSTM4Q8IW00 320 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 FMR1NBQ8N0W7 255 aaPredicted RBP18.64■□□□□ 0.57
PTPN21-208ENST00000556564 AFAP1L1Q8TED9 768 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 FBXO2Q9UK22 296 aaPredicted RBP18.64■□□□□ 0.57
PTPN21-208ENST00000556564 I3L4J1 428 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 PDHXO00330 501 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 WNT10BO00744 389 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 TRIM49P0CI25 452 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 TRIM49CP0CI26 452 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 NCAPGQ9BPX3 1015 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 CTNNA1P35221 906 aaKnown RBP18.64■□□□□ 0.57
PTPN21-208ENST00000556564 KRT71Q3SY84 523 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 CCDC13Q8IYE1 715 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 KCNH7Q9NS40 1196 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 UBE4BO95155 1302 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 MXD4Q14582 209 aaPredicted RBP18.64■□□□□ 0.57
PTPN21-208ENST00000556564 RABEP2Q9H5N1 569 aa18.64■□□□□ 0.57
PTPN21-208ENST00000556564 GMNNO75496 209 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 TSC1Q92574 1164 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 MAP3K20Q9NYL2 800 aaKnown RBP18.63■□□□□ 0.57
PTPN21-208ENST00000556564 PDIA5Q14554 519 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 RUFY4Q6ZNE9 571 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 DNAAF3Q8N9W5 541 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 DGAT1O75907 488 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 CYP2C9P11712 490 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 NAALADL2Q58DX5 795 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 ACOT2P49753 483 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 FBXO16Q8IX29 292 aaPredicted RBP18.63■□□□□ 0.57
PTPN21-208ENST00000556564 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 EPHB1P54762 984 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 SEPT6Q14141 434 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 UBN1Q9NPG3 1134 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 ERAP1Q9NZ08 941 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 ADAM22Q9P0K1 906 aa18.63■□□□□ 0.57
PTPN21-208ENST00000556564 PPP6R3Q5H9R7 873 aaPredicted RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 REEP2Q9BRK0 252 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 PYCARDQ9ULZ3 195 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 CAMTA1Q9Y6Y1 1673 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 TADA2AO75478 443 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 TRIP13Q15645 432 aaPredicted RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 EMSYQ7Z589 1322 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 TAL1P17542 331 aaPredicted RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 PPP2R5EQ16537 467 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 ADAMTS1Q9UHI8 967 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 GNA15P30679 374 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 SMAP1Q8IYB5 467 aaPredicted RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 RPGRIP1Q96KN7 1286 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 EIF3CLB5ME19 914 aaKnown RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 RNF219Q5W0B1 726 aaPredicted RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 POTEAQ6S8J7 498 aa18.62■□□□□ 0.57
PTPN21-208ENST00000556564 EIF3CQ99613 913 aaKnown RBP18.62■□□□□ 0.57
PTPN21-208ENST00000556564 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 BASP1P80723 227 aaKnown RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 CACNB2Q08289 660 aaPredicted RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 PGBD4Q96DM1 585 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 UNC45AQ9H3U1 944 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 KYAT1Q16773 422 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 DUOXA2Q1HG44 320 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 PARD3BQ8TEW8 1205 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 MTIF3Q9H2K0 278 aaKnown RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 CEP72Q9P209 647 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 RGS16O15492 202 aaPredicted RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 TBXAS1P24557 533 aaPredicted RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 NME3Q13232 169 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 LMCD1Q9NZU5 365 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 SCINQ9Y6U3 715 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 PIK3R2O00459 728 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 HEXIM1O94992 359 aaKnown RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 GRIK1P39086 918 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 LMNB2Q03252 620 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 C10orf76Q5T2E6 689 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 KRT39Q6A163 491 aa18.61■□□□□ 0.57
PTPN21-208ENST00000556564 MKRN1Q9UHC7 482 aaKnown RBP18.61■□□□□ 0.57
PTPN21-208ENST00000556564 LCP1P13796 627 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 GCLCP48506 637 aaPredicted RBP18.6■□□□□ 0.57
PTPN21-208ENST00000556564 MMP14P50281 582 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 GUCY2DQ02846 1103 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 ZNF560Q96MR9 790 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 SMYD2Q9NRG4 433 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 GLYCTKQ8IVS8 523 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 PLS3P13797 630 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 CROCCP2Q86T23 111 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 TMEM35BQ8NCS4 154 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms