RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MLLT6P55198 1093 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 ADRM1Q16186 407 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 GFOD2Q3B7J2 385 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 CCDC178Q5BJE1 867 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 GRAMD4Q6IC98 578 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 B3GNT9Q6UX72 402 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 DPP8Q6V1X1 898 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 THEMISQ8N1K5 641 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 PPM1NQ8N819 430 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 WDR48Q8TAF3 677 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 ZBTB8AQ96BR9 441 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 CLIP3Q96DZ5 547 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 ACE2Q9BYF1 805 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 CSRNP2Q9H175 543 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 EPB41L4AQ9HCS5 686 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-210ENST00000553455 SCOCQ9UIL1 159 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 MAGEL2Q9UJ55 1249 aa6.77□□□□□ -1.33
SYNE2-210ENST00000553455 GOLGA6CA6NDK9 693 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 GOLGA6BA6NDN3 693 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 CHGBP05060 677 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 GOLGA6DP0CG33 693 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 KIF23Q02241 960 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-210ENST00000553455 DGKDQ16760 1214 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 CCDC146Q8IYE0 955 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 PPP1R14CQ8TAE6 165 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 COA7Q96BR5 231 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 RUNDC1Q96C34 613 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 HIST1H2AHQ96KK5 128 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 LRGUKQ96M69 825 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 HIST1H2AJQ99878 128 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 POLR3BQ9NW08 1133 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-210ENST00000553455 SPATA6Q9NWH7 488 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-210ENST00000553455 OBP2AQ9NY56 170 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 GOLGA6AQ9NYA3 693 aa6.76□□□□□ -1.33
SYNE2-210ENST00000553455 MAFGO15525 162 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 FXR1P51114 621 aaKnown RBP eCLIP6.75□□□□□ -1.33
SYNE2-210ENST00000553455 DLX2Q07687 328 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-210ENST00000553455 MAP3K12Q12852 859 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 MALLQ13021 153 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 ZNF267Q14586 743 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-210ENST00000553455 MINDY4Q4G0A6 757 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 LILRA6Q6PI73 481 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 CATIPQ7Z7H3 387 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 DGKHQ86XP1 1220 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 MIER2Q8N344 545 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 FNIP1Q8TF40 1166 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 DYDC2Q96IM9 177 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
SYNE2-210ENST00000553455 NMRK2Q9NPI5 230 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 PMF1-BGLAPU3KQ54 211 aa6.75□□□□□ -1.33
SYNE2-210ENST00000553455 A0A0G2JNJ9 132 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 H0Y858 1186 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-210ENST00000553455 KLHL18O94889 574 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 MAP4K4O95819 1239 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-210ENST00000553455 POU2F2P09086 479 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 ZNF28P17035 718 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 EDNRBP24530 442 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 MESP2Q0VG99 397 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 IFIT1BQ5T764 474 aaKnown RBP6.74□□□□□ -1.33
SYNE2-210ENST00000553455 CCSAPQ6IQ19 270 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-210ENST00000553455 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 FAM129CQ86XR2 697 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 FATE1Q969F0 183 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 NKD2Q969F2 451 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-210ENST00000553455 TAAR9Q96RI9 348 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 DMRT3Q9NQL9 472 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 Q9UFV3 132 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
SYNE2-210ENST00000553455 NRP2O60462 931 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 TMEM127O75204 238 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 HSPA6P17066 643 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 GLDCP23378 1020 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 WASP42768 502 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 MCAMP43121 646 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 PPP3CAQ08209 521 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 TOP3AQ13472 1001 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 GBX1Q14549 363 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 SSPNQ14714 243 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 EIF4HQ15056 248 aaKnown RBP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 UAP1L1Q3KQV9 507 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 ATAT1Q5SQI0 421 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 TRMT10BQ6PF06 316 aaKnown RBP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 OTOP2Q7RTS6 562 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 GLB1L2Q8IW92 636 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 GLB1L3Q8NCI6 653 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 SLC35G2Q8TBE7 412 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 NRG4Q8WWG1 115 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 KCNN1Q92952 543 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 HPS3Q969F9 1004 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 SAE1Q9UBE0 346 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 DDX20Q9UHI6 824 aaKnown RBP6.73□□□□□ -1.33
SYNE2-210ENST00000553455 DNAI1Q9UI46 699 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 CDC42EP3Q9UKI2 254 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
SYNE2-210ENST00000553455 IPPQ9Y573 584 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms