RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.04■□□□□ 0.8
PNN-202ENST00000553331 PABPC5Q96DU9 382 aaKnown RBP20.04■□□□□ 0.8
PNN-202ENST00000553331 ZSCAN31Q96LW9 406 aaPredicted RBP20.04■□□□□ 0.8
PNN-202ENST00000553331 EIF2AK1Q9BQI3 630 aaKnown RBP20.04■□□□□ 0.8
PNN-202ENST00000553331 LLPHQ9BRT6 129 aaKnown RBP20.04■□□□□ 0.8
PNN-202ENST00000553331 TTC12Q9H892 705 aaPredicted RBP20.04■□□□□ 0.8
PNN-202ENST00000553331 IRS1P35568 1242 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 GNL2Q13823 731 aaKnown RBP20.03■□□□□ 0.8
PNN-202ENST00000553331 CAMK1Q14012 370 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 CLUL1Q15846 466 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 LONRF3Q496Y0 759 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 TWF2Q6IBS0 349 aaKnown RBP20.03■□□□□ 0.8
PNN-202ENST00000553331 PTCRAQ6ISU1 281 aaPredicted RBP20.03■□□□□ 0.8
PNN-202ENST00000553331 CATSPER4Q7RTX7 472 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 COLGALT1Q8NBJ5 622 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 MICAL1Q8TDZ2 1067 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 PRPF31Q8WWY3 499 aaKnown RBP20.03■□□□□ 0.8
PNN-202ENST00000553331 CASD1Q96PB1 797 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 INO80BQ9C086 356 aaPredicted RBP20.03■□□□□ 0.8
PNN-202ENST00000553331 TMEM117Q9H0C3 514 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 RNF19AQ9NV58 838 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 DACT1Q9NYF0 836 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 PIN4Q9Y237 131 aaKnown RBP20.03■□□□□ 0.8
PNN-202ENST00000553331 PCDHGC5Q9Y5F6 944 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 COL4A3BPQ9Y5P4 624 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 ARID2Q68CP9 1835 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 BRWD1Q9NSI6 2320 aa20.03■□□□□ 0.8
PNN-202ENST00000553331 XIRP2A4UGR9 3374 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 HOXA2O43364 376 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 SLITRK3O94933 977 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 RFC5P40937 340 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 EMC2Q15006 297 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 EXOC8Q8IYI6 725 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 HELQQ8TDG4 1101 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 CCDC43Q96MW1 224 aaKnown RBP20.02■□□□□ 0.8
PNN-202ENST00000553331 TBC1D32Q96NH3 1257 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 TMEM60Q9H2L4 133 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 DHX33Q9H6R0 707 aaKnown RBP20.02■□□□□ 0.8
PNN-202ENST00000553331 CWH43Q9H720 699 aa20.02■□□□□ 0.8
PNN-202ENST00000553331 SH2B1Q9NRF2 756 aaPredicted RBP20.02■□□□□ 0.8
PNN-202ENST00000553331 A0A087WWV3 80 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 A0A0U1RQF3 1178 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 FGF18O76093 207 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 IL9P15248 144 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 LAG3P18627 525 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 ZNF174Q15697 407 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 CLLU1OSQ5K130 101 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 LRRC55Q6ZSA7 311 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 ADGRD2Q7Z7M1 963 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 RBM23Q86U06 439 aaKnown RBP20.01■□□□□ 0.79
PNN-202ENST00000553331 NEK9Q8TD19 979 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 PSPC1Q8WXF1 523 aaKnown RBP20.01■□□□□ 0.79
PNN-202ENST00000553331 MTRQ99707 1265 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 UPF2Q9HAU5 1272 aaKnown RBP20.01■□□□□ 0.79
PNN-202ENST00000553331 CHST12Q9NRB3 414 aa20.01■□□□□ 0.79
PNN-202ENST00000553331 POTEMA6NI47 508 aa20■□□□□ 0.79
PNN-202ENST00000553331 LINC01565O15544 149 aa20■□□□□ 0.79
PNN-202ENST00000553331 NCK2O43639 380 aa20■□□□□ 0.79
PNN-202ENST00000553331 PBX3P40426 434 aa20■□□□□ 0.79
PNN-202ENST00000553331 HMGN5P82970 282 aaKnown RBP20■□□□□ 0.79
PNN-202ENST00000553331 LAMTOR4Q0VGL1 99 aa20■□□□□ 0.79
PNN-202ENST00000553331 LRRC43Q8N309 656 aa20■□□□□ 0.79
PNN-202ENST00000553331 TCP11Q8WWU5 503 aa20■□□□□ 0.79
PNN-202ENST00000553331 LPPQ93052 612 aa20■□□□□ 0.79
PNN-202ENST00000553331 PPP2R3CQ969Q6 453 aa20■□□□□ 0.79
PNN-202ENST00000553331 MTMR9Q96QG7 549 aa20■□□□□ 0.79
PNN-202ENST00000553331 IFT122Q9HBG6 1241 aa20■□□□□ 0.79
PNN-202ENST00000553331 PPME1Q9Y570 386 aa20■□□□□ 0.79
PNN-202ENST00000553331 EOMESO95936 686 aa19.99■□□□□ 0.79
PNN-202ENST00000553331 PHKA2P46019 1235 aa19.99■□□□□ 0.79
PNN-202ENST00000553331 NRIP1P48552 1158 aa19.99■□□□□ 0.79
PNN-202ENST00000553331 DLX2Q07687 328 aaPredicted RBP19.99■□□□□ 0.79
PNN-202ENST00000553331 ZNF598Q86UK7 904 aaKnown RBP19.99■□□□□ 0.79
PNN-202ENST00000553331 HSD17B14Q9BPX1 270 aa19.99■□□□□ 0.79
PNN-202ENST00000553331 TLR9Q9NR96 1032 aa19.99■□□□□ 0.79
PNN-202ENST00000553331 GRXCR2A6NFK2 248 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 ATF7P17544 494 aaPredicted RBP19.98■□□□□ 0.79
PNN-202ENST00000553331 SSTR3P32745 418 aaPredicted RBP19.98■□□□□ 0.79
PNN-202ENST00000553331 LTBRP36941 435 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 TECP42680 631 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 NDUFV1P49821 464 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 RABEP1Q15276 862 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 CSPP1Q1MSJ5 1256 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 PUS10Q3MIT2 529 aaKnown RBP19.98■□□□□ 0.79
PNN-202ENST00000553331 KCNT2Q6UVM3 1135 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 FERMT3Q86UX7 667 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 RNF149Q8NC42 400 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 FBXO18Q8NFZ0 1043 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 PIGOQ8TEQ8 1089 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 ZNF558Q96NG5 402 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 FOXP1Q9H334 677 aaPredicted RBP19.98■□□□□ 0.79
PNN-202ENST00000553331 INPP5FQ9Y2H2 1132 aa19.98■□□□□ 0.79
PNN-202ENST00000553331 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
PNN-202ENST00000553331 GAS2O43903 313 aaKnown RBP19.97■□□□□ 0.79
PNN-202ENST00000553331 ERVFC1P60507 584 aa19.97■□□□□ 0.79
PNN-202ENST00000553331 UBE3AQ05086 875 aa19.97■□□□□ 0.79
PNN-202ENST00000553331 COL19A1Q14993 1142 aa19.97■□□□□ 0.79
PNN-202ENST00000553331 PLPP4Q5VZY2 271 aa19.97■□□□□ 0.79
PNN-202ENST00000553331 SRGAP1Q7Z6B7 1085 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms