RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TMEM127O75204 238 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 BAG2O95816 211 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 CST3P01034 146 aaPredicted RBP7.21□□□□□ -1.26
VPS29-210ENST00000552130 SOD2P04179 222 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 CAPNS1P04632 268 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 TNFSF4P23510 183 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 NAP1L1P55209 391 aaKnown RBP7.21□□□□□ -1.26
VPS29-210ENST00000552130 BPIFB3P59826 476 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 OCRLQ01968 901 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 LRRC32Q14392 662 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ACAP2Q15057 778 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 CLUL1Q15846 466 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 BBS9Q3SYG4 887 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ATAT1Q5SQI0 421 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 MFSD4BQ5TF39 518 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 NEK10Q6ZWH5 1172 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ENOSF1Q7L5Y1 443 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 DDX53Q86TM3 631 aaKnown RBP7.21□□□□□ -1.26
VPS29-210ENST00000552130 ANKRD13BQ86YJ7 626 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 KRT78Q8N1N4 520 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 PPP1R35Q8TAP8 253 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ADAMTS18Q8TE60 1221 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ZFPM2Q8WW38 1151 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 MYLIPQ8WY64 445 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 HPS3Q969F9 1004 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 TMEM60Q9H2L4 133 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 TSPY26PQ9H489 355 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ITM2CQ9NQX7 267 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 ATP8A2Q9NTI2 1148 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 SPTLC3Q9NUV7 552 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 THG1LQ9NWX6 298 aaKnown RBP7.21□□□□□ -1.26
VPS29-210ENST00000552130 ZSWIM5Q9P217 1185 aa7.21□□□□□ -1.26
VPS29-210ENST00000552130 FSD2A1L4K1 749 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 SLC22A31A6NKX4 558 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 FRS3O43559 492 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 TUSC2O75896 110 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 GLRX3O76003 335 aaKnown RBP7.2□□□□□ -1.26
VPS29-210ENST00000552130 TBX18O95935 607 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 CSTBP04080 98 aaKnown RBP7.2□□□□□ -1.26
VPS29-210ENST00000552130 TPM2P07951 284 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 RAG1P15918 1043 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 KIF5BP33176 963 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 STAT1P42224 750 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 ATXN1P54253 815 aaKnown RBP7.2□□□□□ -1.26
VPS29-210ENST00000552130 HECTD3Q5T447 861 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 CDCP2Q5VXM1 449 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 IZUMO3Q5VZ72 239 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 PLBD1Q6P4A8 553 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 CPLX2Q6PUV4 134 aaKnown RBP7.2□□□□□ -1.26
VPS29-210ENST00000552130 DSTYKQ6XUX3 929 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 HID1Q8IV36 788 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 GRAMD1CQ8IYS0 662 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 ESX1Q8N693 406 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 TEX9Q8N6V9 391 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 PIWIL2Q8TC59 973 aaKnown RBP7.2□□□□□ -1.26
VPS29-210ENST00000552130 KCNN1Q92952 543 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 LGR4Q9BXB1 951 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 DMRT3Q9NQL9 472 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 NSMCE4AQ9NXX6 385 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 REV1Q9UBZ9 1251 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 JAG2Q9Y219 1238 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 ZKSCAN5Q9Y2L8 839 aa7.2□□□□□ -1.26
VPS29-210ENST00000552130 NUAK1O60285 661 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 CRTAMO95727 393 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 CBX7O95931 251 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 APPP05067 770 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 EPHX1P07099 455 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 MTHFD1P11586 935 aaKnown RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 KCNA2P16389 499 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 PEX2P28328 305 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 DEKP35659 375 aaKnown RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 PIK3CBP42338 1070 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 TTC31Q49AM3 519 aaPredicted RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 PRAMEF13Q5VWM6 474 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 MAMDC2Q7Z304 686 aaPredicted RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 ERC1Q8IUD2 1116 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 TEX11Q8IYF3 940 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 NRSN1Q8IZ57 195 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 TRAPPC12Q8WVT3 735 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 SNX21Q969T3 373 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 LTV1Q96GA3 475 aaPredicted RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 NT5C1BQ96P26 610 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 IWS1Q96ST2 819 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 MAP3K14Q99558 947 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 GTPBP4Q9BZE4 634 aaKnown RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 NUP62CLQ9H1M0 184 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 ADAMTS10Q9H324 1103 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 FAM86C1Q9NVL1 165 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 ARGLU1Q9NWB6 273 aaPredicted RBP7.19□□□□□ -1.26
VPS29-210ENST00000552130 SEL1LQ9UBV2 794 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 APEX2Q9UBZ4 518 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 GPR34Q9UPC5 381 aa7.19□□□□□ -1.26
VPS29-210ENST00000552130 TBX1O43435 398 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 AHCYL1O43865 530 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 DLX3O60479 287 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 DKC1O60832 514 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS29-210ENST00000552130 H2AFYO75367 372 aaKnown RBP7.18□□□□□ -1.26
VPS29-210ENST00000552130 DNTTP04053 509 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms