RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NKAPLQ5M9Q1 402 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 PIK3R6Q5UE93 754 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 ANGEL2Q5VTE6 544 aaKnown RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 ZCCHC8Q6NZY4 707 aaKnown RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 FBXO46Q6PJ61 603 aaPredicted RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 DPP8Q6V1X1 898 aaPredicted RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 LBX2Q6XYB7 198 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 OTOP1Q7RTM1 612 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 PPP1R42Q7Z4L9 355 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 FERMT3Q86UX7 667 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 DDX42Q86XP3 938 aaKnown RBP eCLIP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 JAMLQ86YT9 394 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 STK11IPQ8N1F8 1099 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 NGEFQ8N5V2 710 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 TSPYL6Q8N831 410 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 C8orf58Q8NAV2 365 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 RCBTB1Q8NDN9 531 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 SUPT20HQ8NEM7 779 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 OR2W6PQ8NHA6 318 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 PANK1Q8TE04 598 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 USP7Q93009 1102 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 SHISA4Q96DD7 197 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 SCLYQ96I15 445 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 FCRL2Q96LA5 508 aaPredicted RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 PLA2G12BQ9BX93 195 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 ATP13A1Q9HD20 1204 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 CABP5Q9NP86 173 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 TYW1Q9NV66 732 aaKnown RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 DDX56Q9NY93 547 aaKnown RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 GGA3Q9NZ52 723 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 SAMD15Q9P1V8 674 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 CHPF2Q9P2E5 772 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 FZD1Q9UP38 647 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 PCDHA2Q9Y5H9 948 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 TIMM13Q9Y5L4 95 aaPredicted RBP3.02□□□□□ -1.93
CPSF6-207ENST00000551516 DNAH12Q6ZR08 3092 aa3.02□□□□□ -1.93
CPSF6-207ENST00000551516 ATRNL1Q5VV63 1379 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 NUP98P52948 1817 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 LOC100996750A0A140TA64 210 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 C7orf72A4D263 438 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 UBE2Q2LH0YL09 131 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ARVCFO00192 962 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ARNTLO00327 626 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TCERG1O14776 1098 aaKnown RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 BRINP1O60477 761 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 MSCO60682 206 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 GAS7O60861 476 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 USP2O75604 605 aaPredicted RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TGFB1P01137 390 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ITGB2P05107 769 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 PDGFRBP09619 1106 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 SRGAP2CP0DJJ0 459 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 IL1R1P14778 569 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 EN2P19622 333 aaPredicted RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 PMLP29590 882 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 GSK3AP49840 483 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TEKQ02763 1124 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 STRN3Q13033 797 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 IKZF1Q13422 519 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF460Q14592 562 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 DHCR24Q15392 516 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 PKN2Q16513 984 aaKnown RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 INF2Q27J81 1249 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 EPHA10Q5JZY3 1008 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 RNF219Q5W0B1 726 aaPredicted RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 PKN3Q6P5Z2 889 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ZPBP2Q6X784 338 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 C16orf59Q7L2K0 433 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 G2E3Q7L622 706 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 KIF18BQ86Y91 864 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 CCDC103Q8IW40 242 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 RPUSD2Q8IZ73 545 aaKnown RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 AFAP1L2Q8N4X5 818 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 PRPF38AQ8NAV1 312 aaKnown RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 WDR66Q8TBY9 1149 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 RPGRQ92834 1020 aaKnown RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 FBXW5Q969U6 566 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF333Q96JL9 665 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 CLMNQ96JQ2 1002 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TTC1Q99614 292 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 MYOZ2Q9NPC6 264 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 BSDC1Q9NW68 430 aaPredicted RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ERVK13-1Q9NX77 482 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 LMCD1Q9NZU5 365 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TNFRSF10DQ9UBN6 386 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TRMT112Q9UI30 125 aaKnown RBP3.01□□□□□ -1.93
CPSF6-207ENST00000551516 SLC5A6Q9Y289 635 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ZKSCAN5Q9Y2L8 839 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 PTPN22Q9Y2R2 807 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 ANKRD36CQ5JPF3 1778 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TAF1P21675 1872 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 TRPM7Q96QT4 1865 aa3.01□□□□□ -1.93
CPSF6-207ENST00000551516 MED23Q9ULK4 1368 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 CHD7Q9P2D1 2997 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 LAMB4A4D0S4 1761 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 PAPPA2Q9BXP8 1791 aa3□□□□□ -1.93
CPSF6-207ENST00000551516 DDX60Q8IY21 1712 aaKnown RBP3□□□□□ -1.93
CPSF6-207ENST00000551516 A0A1W2PQ45 241 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms