RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 DHX38Q92620 1227 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 INPP4AQ96PE3 977 aaPredicted RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 TRAF3IP3Q9Y228 551 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 MYZAPP0CAP1 466 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 NOVP48745 357 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 CETN1Q12798 172 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 PHLDB3Q6NSJ2 640 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 CYFIP1Q7L576 1253 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 ZNF720Q7Z2F6 126 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 RPUSD2Q8IZ73 545 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 MKL1Q969V6 931 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 MRRFQ96E11 262 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 LARSQ9P2J5 1176 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 UTP11Q9Y3A2 253 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 F8VZ95 297 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 RGL2O15211 777 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 FERP16591 822 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 SEMA3FQ13275 785 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 Q4G0T1 1027 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 TATDN1Q6P1N9 297 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 C1orf186Q6ZWK4 172 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 ARHGEF19Q8IW93 802 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 TAB3Q8N5C8 712 aaPredicted RBP14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 MGARPQ8TDB4 240 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 LMBR1Q8WVP7 490 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 HSD17B14Q9BPX1 270 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 IDI2Q9BXS1 227 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 SERPINA10Q9UK55 444 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 MYO3BQ8WXR4 1341 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 COL22A1Q8NFW1 1626 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 LAMB1P07942 1786 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 GOLGA8KD6RF30 607 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 MDM1Q8TC05 714 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 CNKSR1Q969H4 720 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 MLXIPLQ9NP71 852 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 IGLV3-22A0A075B6J6 115 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 IFNAR2P48551 515 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 MTMR1Q13613 665 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 CCDC38Q502W7 563 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 COBLL1Q53SF7 1204 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 LLGL2Q6P1M3 1020 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 CBWD2Q8IUF1 395 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 PASD1Q8IV76 773 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 KRT35Q92764 455 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 GMCL1Q96IK5 515 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 TAAR1Q96RJ0 339 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 EDEM3Q9BZQ6 932 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 TAF1DQ9H5J8 278 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 PCDHGC5Q9Y5F6 944 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 SPATA31A6Q5VVP1 1343 aa14.8□□□□□ -0.04
PRPF40B-209ENST00000548825 LCA5LO95447 670 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 HSD17B3P37058 310 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 AARSP49588 968 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 PPP3CAQ08209 521 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 HYIQ5T013 277 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 CCDC105Q8IYK2 499 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 MAGOHBQ96A72 148 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 ADAM33Q9BZ11 813 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 PSD3Q9NYI0 1048 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 FAM169AQ9Y6X4 670 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 ZHX2Q9Y6X8 837 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 PLIN4Q96Q06 1357 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 DCDC2CA8MYV0 355 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 EGFRP00533 1210 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 CYP3A7P24462 503 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 BFSP1Q12934 665 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 IFT88Q13099 833 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 SEZ6Q53EL9 994 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 MUM1L1Q5H9M0 696 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 OTUD6AQ7L8S5 288 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 EEPD1Q7L9B9 569 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 EHMT1Q9H9B1 1298 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 SIX2Q9NPC8 291 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 ATP9AO75110 1047 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 PSMD10O75832 226 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 SGPL1O95470 568 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 BIRC3Q13489 604 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 CAPN12Q6ZSI9 719 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 CCDC26Q8TAB7 109 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 C18orf8Q96DM3 657 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 APEX2Q9UBZ4 518 aa14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 BZW2Q9Y6E2 419 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-209ENST00000548825 CYP3A4P08684 503 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 PRLRP16471 622 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 GAP43P17677 238 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 MXI1P50539 228 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 VAMP7P51809 220 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 SPP2Q13103 211 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 FBXW10Q5XX13 1052 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 ZNF662Q6ZS27 426 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms