RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ST18O60284 1047 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 JAK3P52333 1124 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 BMS1Q14692 1282 aaKnown RBP24.03■■□□□ 1.44
SSH3-211ENST00000534112 NTRK3Q16288 839 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 CCDC148Q8NFR7 591 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 KCNB2Q92953 911 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 GJA10Q969M2 543 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 GCOM2Q9BZD3 368 aaPredicted RBP24.03■■□□□ 1.44
SSH3-211ENST00000534112 CHST12Q9NRB3 414 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 NID2Q14112 1375 aa24.03■■□□□ 1.44
SSH3-211ENST00000534112 CA8P35219 290 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 CDC42EP1Q00587 391 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 LRCH2Q5VUJ6 765 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 UBALD2Q8IYN6 164 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 ATOH1Q92858 354 aaPredicted RBP24.02■■□□□ 1.44
SSH3-211ENST00000534112 TMEM169Q96HH4 297 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
SSH3-211ENST00000534112 TEKT3Q9BXF9 490 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 RNF26Q9BY78 433 aaPredicted RBP24.02■■□□□ 1.44
SSH3-211ENST00000534112 NIFKQ9BYG3 293 aaKnown RBP24.02■■□□□ 1.44
SSH3-211ENST00000534112 VPS54Q9P1Q0 977 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 SORCS3Q9UPU3 1222 aa24.02■■□□□ 1.44
SSH3-211ENST00000534112 CDC45O75419 566 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 BRD1O95696 1058 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 MTHFRP42898 656 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 PHKA2P46019 1235 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 NUBP1P53384 320 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 MTMR3Q13615 1198 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 VPS52Q8N1B4 723 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 FBXL16Q8N461 479 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 TRAIPQ9BWF2 469 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 SLC26A6Q9BXS9 759 aa24.01■■□□□ 1.43
SSH3-211ENST00000534112 CFAP54Q96N23 3096 aa24■■□□□ 1.43
SSH3-211ENST00000534112 WEE2P0C1S8 567 aa24■■□□□ 1.43
SSH3-211ENST00000534112 MTERF2Q49AM1 385 aa24■■□□□ 1.43
SSH3-211ENST00000534112 XKR3Q5GH77 459 aa24■■□□□ 1.43
SSH3-211ENST00000534112 RARS2Q5T160 578 aaKnown RBP24■■□□□ 1.43
SSH3-211ENST00000534112 BLOC1S2Q6QNY1 142 aa24■■□□□ 1.43
SSH3-211ENST00000534112 TMEM173Q86WV6 379 aaPredicted RBP24■■□□□ 1.43
SSH3-211ENST00000534112 C12orf76Q8N812 135 aaPredicted RBP24■■□□□ 1.43
SSH3-211ENST00000534112 RDM1Q8NG50 284 aa24■■□□□ 1.43
SSH3-211ENST00000534112 CEP89Q96ST8 783 aa24■■□□□ 1.43
SSH3-211ENST00000534112 ZBP1Q9H171 429 aa24■■□□□ 1.43
SSH3-211ENST00000534112 SEPT9Q9UHD8 586 aaPredicted RBP24■■□□□ 1.43
SSH3-211ENST00000534112 A0A087WZ62 844 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 IGKV6-21A0A0C4DH24 114 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.99■■□□□ 1.43
SSH3-211ENST00000534112 TMEM150BA6NC51 233 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 GFRA3O60609 400 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 ZC3H11AO75152 810 aaKnown RBP eCLIP23.99■■□□□ 1.43
SSH3-211ENST00000534112 PSMD10O75832 226 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 STBD1O95210 358 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 IFNAR1P17181 557 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 DNM2P50570 870 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 MIER3Q7Z3K6 550 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 TMEM87AQ8NBN3 555 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 TBCKQ8TEA7 893 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 AUTS2Q8WXX7 1259 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 RSPH1Q8WYR4 309 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 LPPQ93052 612 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 FDXACB1Q9BRP7 624 aaPredicted RBP23.99■■□□□ 1.43
SSH3-211ENST00000534112 AGXT2Q9BYV1 514 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 SNX14Q9Y5W7 946 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 IRAK3Q9Y616 596 aa23.99■■□□□ 1.43
SSH3-211ENST00000534112 KMT2EQ8IZD2 1858 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 MYO15AQ9UKN7 3530 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 H0Y858 1186 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 CTSAP10619 480 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 SFPQP23246 707 aaKnown RBP eCLIP23.98■■□□□ 1.43
SSH3-211ENST00000534112 POLGP54098 1239 aaPredicted RBP23.98■■□□□ 1.43
SSH3-211ENST00000534112 NLRP5P59047 1200 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 LONRF3Q496Y0 759 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 Q4G0T1 1027 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 ATAT1Q5SQI0 421 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 TWF2Q6IBS0 349 aaKnown RBP23.98■■□□□ 1.43
SSH3-211ENST00000534112 KANK3Q6NY19 840 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 DDX53Q86TM3 631 aaKnown RBP23.98■■□□□ 1.43
SSH3-211ENST00000534112 IGSF21Q96ID5 467 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 SH2D3AQ9BRG2 576 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 SH3GLB2Q9NR46 395 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 DZANK1Q9NVP4 752 aa23.98■■□□□ 1.43
SSH3-211ENST00000534112 GALR2O43603 387 aaPredicted RBP23.97■■□□□ 1.43
SSH3-211ENST00000534112 ASGR2P07307 311 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 GALTP07902 379 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 SKIP12755 728 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 EPCAMP16422 314 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 RPS6KB1P23443 525 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 PTPRZ1P23471 2315 aaPredicted RBP23.97■■□□□ 1.43
SSH3-211ENST00000534112 HSPA4P34932 840 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 GLB1LQ6UWU2 654 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 B3GNT9Q6UX72 402 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 ZDHHC14Q8IZN3 488 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 INO80BQ9C086 356 aaPredicted RBP23.97■■□□□ 1.43
SSH3-211ENST00000534112 SMOC2Q9H3U7 446 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 NRDE2Q9H7Z3 1164 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 TBC1D13Q9NVG8 400 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 SUCLA2Q9P2R7 463 aaPredicted RBP23.97■■□□□ 1.43
SSH3-211ENST00000534112 LIMD1Q9UGP4 676 aa23.97■■□□□ 1.43
SSH3-211ENST00000534112 PIN4Q9Y237 131 aaKnown RBP23.97■■□□□ 1.43
SSH3-211ENST00000534112 CYP3A7-CYP3A51PA0A087WV96 503 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms