RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 RFFLQ8WZ73 363 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 SYN2Q92777 582 aaPredicted RBP12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 MYCBPQ99417 103 aaPredicted RBP12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 GOLPH3Q9H4A6 298 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 NOC2LQ9Y3T9 749 aaKnown RBP12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZHX2Q9Y6X8 837 aa12.15□□□□□ -0.47
PCDHGB4-201ENST00000519479 K7ERI5 159 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 ATF2P15336 505 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 OSBPP22059 807 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 TMOD1P28289 359 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 SREBF1P36956 1147 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 PSMC5P62195 406 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 CCNA1P78396 465 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 MOXD1Q6UVY6 613 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 CACNA2D3Q8IZS8 1091 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 KCNQ5Q9NR82 932 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 NOVA2Q9UNW9 492 aaKnown RBP12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 ANKRD65E5RJM6 399 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 THAP12O43422 761 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 ECEL1O95672 775 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 GALCP54803 685 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 GIT2Q14161 759 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 PNMA8AQ86V59 439 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 WRNIP1Q96S55 665 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 ANKZF1Q9H8Y5 726 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 VIPAS39Q9H9C1 493 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 SPEF2Q9C093 1822 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 KRT15P19012 456 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 PSMC6P62333 389 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 PPP1R14CQ8TAE6 165 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 STK33Q9BYT3 514 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 VPS37BQ9H9H4 285 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 L1RE1Q9UN81 338 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZNF148Q9UQR1 794 aa12.14□□□□□ -0.47
PCDHGB4-201ENST00000519479 PKD1L3Q7Z443 1732 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 GKAP1Q5VSY0 366 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 GJB7Q6PEY0 223 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 MCPH1Q8NEM0 835 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 TRIM11Q96F44 468 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 AMACRQ9UHK6 382 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 TNNC2P02585 160 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 SFNP31947 248 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 GMPSP49915 693 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 NPY5RQ15761 445 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 SWSAP1Q6NVH7 229 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 APEX2Q9UBZ4 518 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 CAPN7Q9Y6W3 813 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 HMGB1P1B2RPK0 211 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 FDX1P10109 184 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLCO1A2P46721 670 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 CASP4P49662 377 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 RWDD2BP57060 319 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 ARHGEF6Q15052 776 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 TMEM119Q4V9L6 283 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 CYP2W1Q8TAV3 490 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 RUNDC3BQ96NL0 473 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 HPCAL4Q9UM19 191 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZBTB16Q05516 673 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 BFSP1Q12934 665 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 CCDC89Q8N998 374 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 GLIS3Q8NEA6 775 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 FAM81BQ96LP2 452 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 ZNF446Q9NWS9 450 aa12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
PCDHGB4-201ENST00000519479 C5P01031 1676 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 SART1O43290 800 aaKnown RBP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 IFNAR2P48551 515 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 KRT39Q6A163 491 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 CAPN12Q6ZSI9 719 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MMGT1Q8N4V1 131 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 INO80BQ9C086 356 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
PCDHGB4-201ENST00000519479 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms