RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 BCORQ6W2J9 1755 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 TRIM75PA6NK02 468 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 SERPINB2P05120 415 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 GNAT1P11488 350 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 COL8A1P27658 744 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 GPR19Q15760 415 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 SKOR2Q2VWA4 1001 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 INAVAQ3KP66 663 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLC9C1Q4G0N8 1177 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 CCDC93Q567U6 631 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 RTP2Q5QGT7 225 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 C14orf80Q86SX3 495 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 NBPF11Q86T75 865 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 RASSF3Q86WH2 238 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 NLGN4XQ8N0W4 816 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 USHBP1Q8N6Y0 703 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMEM169Q96HH4 297 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 MEGF10Q96KG7 1140 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 FCRL2Q96LA5 508 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 SPOCK3Q9BQ16 436 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 RTFDC1Q9BY42 306 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 RHOBTB2Q9BYZ6 727 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCIF1Q9H4Z3 704 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 ACSS2Q9NR19 701 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 ADARB2Q9NS39 739 aaKnown RBP5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 SPTLC3Q9NUV7 552 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 OXSMQ9NWU1 459 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 MKS1Q9NXB0 559 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 IP6K2Q9UHH9 426 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 KCNG1Q9UIX4 513 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 MINPP1Q9UNW1 487 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 RAXQ9Y2V3 346 aa5.9□□□□□ -1.46
HMGB1P23-201ENST00000518743 CARMIL3Q8ND23 1372 aa5.9□□□□□ -1.47
HMGB1P23-201ENST00000518743 COL11A2P13942 1736 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 FZD9O00144 591 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 MSCO60682 206 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 CYP17A1P05093 508 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 ITGB2P05107 769 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 RBP3P10745 1247 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 PDE6BP35913 854 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 IARSP41252 1262 aaKnown RBP5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 LAPTM5Q13571 262 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 ABCB5Q2M3G0 1257 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 HHIPL2Q6UWX4 724 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 C11orf96Q7Z7L8 435 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 NME9Q86XW9 330 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 CPA6Q8N4T0 437 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 TTC17Q96AE7 1141 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 ACAP3Q96P50 834 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 FOXP3Q9BZS1 431 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 EPB41L1Q9H4G0 881 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 CLDND1Q9NY35 253 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 USP36Q9P275 1121 aaKnown RBP5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 PTPN22Q9Y2R2 807 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 NOC2LQ9Y3T9 749 aaKnown RBP5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 CNTNAP4Q9C0A0 1308 aa5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 MYH14Q7Z406 1995 aaKnown RBP5.89□□□□□ -1.47
HMGB1P23-201ENST00000518743 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 KRIT1O00522 736 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 DGKIO75912 1065 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 CEACAM5P06731 702 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 LCP1P13796 627 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 TM4SF1P30408 202 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 CORO7P57737 925 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 NFIXQ14938 502 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 GAB4Q2WGN9 574 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 PLA2G4EQ3MJ16 856 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 BROXQ5VW32 411 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 PGM2L1Q6PCE3 622 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 FRMD7Q6ZUT3 714 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 CBARPQ8N350 705 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 CISD2Q8N5K1 135 aaKnown RBP5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZNF610Q8N9Z0 462 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 CLRN3Q8NCR9 226 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 C1orf162Q8NEQ5 155 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 GATA6Q92908 595 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 TRMT2BQ96GJ1 504 aaKnown RBP5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 FAXDC2Q96IV6 333 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZNF333Q96JL9 665 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 ATG3Q9NT62 314 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 TNFRSF10DQ9UBN6 386 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 KIF7Q2M1P5 1343 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 TTC21BQ7Z4L5 1316 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 SPTBN4Q9H254 2564 aa5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 COL5A3P25940 1745 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P23-201ENST00000518743 C7orf72A4D263 438 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 KLHL33A6NCF5 533 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 NBPF7P0C2Y1 421 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 PHKG2P15735 406 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 PDE6AP16499 860 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 CD40P25942 277 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 GJA4P35212 333 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 OXCT1P55809 520 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 IRF9Q00978 393 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 LRRC32Q14392 662 aa5.87□□□□□ -1.47
HMGB1P23-201ENST00000518743 TERF2Q15554 542 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms