RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 ZNF174Q15697 407 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 TCEAL5Q5H9L2 206 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 KLHL23Q8NBE8 558 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 SPPL3Q8TCT6 385 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 PSPC1Q8WXF1 523 aaKnown RBP25.73■■□□□ 1.71
CLDND1-230ENST00000514537 NLRP4Q96MN2 994 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 TMEM117Q9H0C3 514 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 UBE2ZQ9H832 354 aaPredicted RBP25.73■■□□□ 1.71
CLDND1-230ENST00000514537 ANKEF1Q9NU02 776 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 TYW1Q9NV66 732 aaKnown RBP25.73■■□□□ 1.71
CLDND1-230ENST00000514537 DACT1Q9NYF0 836 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 MYO7AQ13402 2215 aa25.73■■□□□ 1.71
CLDND1-230ENST00000514537 NLRC5Q86WI3 1866 aa25.72■■□□□ 1.71
CLDND1-230ENST00000514537 POTEMA6NI47 508 aa25.72■■□□□ 1.71
CLDND1-230ENST00000514537 HOXA2O43364 376 aa25.72■■□□□ 1.71
CLDND1-230ENST00000514537 TRAPPC10P48553 1259 aa25.72■■□□□ 1.71
CLDND1-230ENST00000514537 ZNF598Q86UK7 904 aaKnown RBP25.72■■□□□ 1.71
CLDND1-230ENST00000514537 TCP11Q8WWU5 503 aa25.72■■□□□ 1.71
CLDND1-230ENST00000514537 TRAIPQ9BWF2 469 aa25.72■■□□□ 1.71
CLDND1-230ENST00000514537 EOMESO95936 686 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 U2AF2P26368 475 aaKnown RBP eCLIP25.71■■□□□ 1.711e-8■■□□□ 13.8
CLDND1-230ENST00000514537 LAMTOR4Q0VGL1 99 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 GNL2Q13823 731 aaKnown RBP25.71■■□□□ 1.71
CLDND1-230ENST00000514537 COL19A1Q14993 1142 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 TTC38Q5R3I4 469 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 TMX3Q96JJ7 454 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 TBC1D32Q96NH3 1257 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 CASD1Q96PB1 797 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 CWH43Q9H720 699 aa25.71■■□□□ 1.71
CLDND1-230ENST00000514537 BMP2KQ9NSY1 1161 aaPredicted RBP25.71■■□□□ 1.71
CLDND1-230ENST00000514537 ASAP2O43150 1006 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 CD2BP2O95400 341 aaKnown RBP25.7■■□□□ 1.7
CLDND1-230ENST00000514537 OR52Z1P0C646 297 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 SRGAP2CP0DJJ0 459 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 SPATA31C1P0DKV0 1188 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 XRCC6P12956 609 aaKnown RBP eCLIP25.7■■□□□ 1.7
CLDND1-230ENST00000514537 DNAJB1P25685 340 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 SPOUT1Q5T280 376 aaKnown RBP25.7■■□□□ 1.7
CLDND1-230ENST00000514537 SRGAP1Q7Z6B7 1085 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 FERMT3Q86UX7 667 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 UHRF1Q96T88 793 aaPredicted RBP25.7■■□□□ 1.7
CLDND1-230ENST00000514537 MTRQ99707 1265 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 XPNPEP1Q9NQW7 623 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 AAASQ9NRG9 546 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 PCDHB12Q9Y5F1 795 aa25.7■■□□□ 1.7
CLDND1-230ENST00000514537 NCOR1O75376 2440 aa25.69■■□□□ 1.7
CLDND1-230ENST00000514537 ATF7P17544 494 aaPredicted RBP25.69■■□□□ 1.7
CLDND1-230ENST00000514537 TECP42680 631 aa25.69■■□□□ 1.7
CLDND1-230ENST00000514537 LRRC55Q6ZSA7 311 aa25.69■■□□□ 1.7
CLDND1-230ENST00000514537 CATSPER4Q7RTX7 472 aa25.69■■□□□ 1.7
CLDND1-230ENST00000514537 C4orf32Q8N8J7 132 aa25.69■■□□□ 1.7
CLDND1-230ENST00000514537 HCSTQ9UBK5 93 aa25.69■■□□□ 1.7
CLDND1-230ENST00000514537 NOL7Q9UMY1 257 aaKnown RBP25.69■■□□□ 1.7
CLDND1-230ENST00000514537 NCK2O43639 380 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 DGAT1O75907 488 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 PHKA2P46019 1235 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 MCM2P49736 904 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 RARRES1P49788 294 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 LEXMQ3ZCV2 418 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 CLLU1OSQ5K130 101 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 CATSPER3Q86XQ3 398 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 ABI1Q8IZP0 508 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 RNF169Q8NCN4 708 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 PIGOQ8TEQ8 1089 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 POF1BQ8WVV4 589 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 PABPC5Q96DU9 382 aaKnown RBP25.68■■□□□ 1.7
CLDND1-230ENST00000514537 MINDY3Q9H8M7 445 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 TUFT1Q9NNX1 390 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 PIN4Q9Y237 131 aaKnown RBP25.68■■□□□ 1.7
CLDND1-230ENST00000514537 KIF3AQ9Y496 699 aa25.68■■□□□ 1.7
CLDND1-230ENST00000514537 A0A087WWV3 80 aa25.67■■□□□ 1.7
CLDND1-230ENST00000514537 TNFRSF10AO00220 468 aa25.67■■□□□ 1.7
CLDND1-230ENST00000514537 KCNA5P22460 613 aa25.67■■□□□ 1.7
CLDND1-230ENST00000514537 TOB1P50616 345 aaPredicted RBP25.67■■□□□ 1.7
CLDND1-230ENST00000514537 MXD4Q14582 209 aaPredicted RBP25.67■■□□□ 1.7
CLDND1-230ENST00000514537 TWF2Q6IBS0 349 aaKnown RBP25.67■■□□□ 1.7
CLDND1-230ENST00000514537 COLGALT1Q8NBJ5 622 aa25.67■■□□□ 1.7
CLDND1-230ENST00000514537 RNF149Q8NC42 400 aa25.67■■□□□ 1.7
CLDND1-230ENST00000514537 POLR3CQ9BUI4 534 aaPredicted RBP25.67■■□□□ 1.7
CLDND1-230ENST00000514537 AGPAT5Q9NUQ2 364 aa25.67■■□□□ 1.7
CLDND1-230ENST00000514537 MED24O75448 989 aa25.66■■□□□ 1.7
CLDND1-230ENST00000514537 SKIP12755 728 aa25.66■■□□□ 1.7
CLDND1-230ENST00000514537 LAG3P18627 525 aa25.66■■□□□ 1.7
CLDND1-230ENST00000514537 UBE3AQ05086 875 aa25.66■■□□□ 1.7
CLDND1-230ENST00000514537 CSPP1Q1MSJ5 1256 aa25.66■■□□□ 1.7
CLDND1-230ENST00000514537 LRRC43Q8N309 656 aa25.66■■□□□ 1.7
CLDND1-230ENST00000514537 FNDC1Q4ZHG4 1894 aaPredicted RBP25.66■■□□□ 1.7
CLDND1-230ENST00000514537 ZNF623O75123 536 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 CSPG5O95196 566 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 HOXA11P31270 313 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-230ENST00000514537 IRS1P35568 1242 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 ARL2P36404 184 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 POU5F1BQ06416 359 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 HYAL1Q12794 435 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 NBR1Q14596 966 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-230ENST00000514537 CCDC43Q96MW1 224 aaKnown RBP25.65■■□□□ 1.7
CLDND1-230ENST00000514537 NECAB3Q96P71 396 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-230ENST00000514537 FAM105AQ9NUU6 356 aa25.65■■□□□ 1.7
CLDND1-230ENST00000514537 FGF18O76093 207 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms