RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 TBC1D9BQ66K14 1250 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 Q8N1Y9 231 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 NXPE1Q8N323 547 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 CHST14Q8NCH0 376 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 FAM89AQ96GI7 184 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 FCRL2Q96LA5 508 aaPredicted RBP8.54□□□□□ -1.04
RFC1-213ENST00000512275 PIM2Q9P1W9 311 aa8.54□□□□□ -1.04
RFC1-213ENST00000512275 ZC3H7BQ9UGR2 993 aaKnown RBP8.54□□□□□ -1.04
RFC1-213ENST00000512275 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
RFC1-213ENST00000512275 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 CCDC66A2RUB6 948 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 CYP26A1O43174 497 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 MYO1BO43795 1136 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 HMMRO75330 724 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 FOSL1P15407 271 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 TMPRSS15P98073 1019 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 LSAMPQ13449 338 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 LAPTM5Q13571 262 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 CREB3L3Q68CJ9 461 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 MCTP1Q6DN14 999 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 CLEC4GQ6UXB4 293 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 DPF3Q92784 378 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 FBXW5Q969U6 566 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
RFC1-213ENST00000512275 STK32BQ9NY57 414 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 HDAC5Q9UQL6 1122 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 EXOC6BQ9Y2D4 811 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 FAN1Q9Y2M0 1017 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 TIMM13Q9Y5L4 95 aaPredicted RBP8.53□□□□□ -1.04
RFC1-213ENST00000512275 CACNA1SQ13698 1873 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 ANKRD31Q8N7Z5 1873 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 CDHR2Q9BYE9 1310 aa8.53□□□□□ -1.04
RFC1-213ENST00000512275 ABCC12Q96J65 1359 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 KIAA1324LA8MWY0 1029 aaPredicted RBP8.52□□□□□ -1.05
RFC1-213ENST00000512275 FAM47E-STBD1D6RA91 191 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 COBLO75128 1261 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 NTSR2O95665 410 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.05
RFC1-213ENST00000512275 LSSP48449 732 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 RPL11P62913 178 aaKnown RBP8.52□□□□□ -1.05
RFC1-213ENST00000512275 FOXO4P98177 505 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 MCL1Q07820 350 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 FAM47CQ5HY64 1035 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 LMBR1LQ6UX01 489 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 C16orf59Q7L2K0 433 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 COL23A1Q86Y22 540 aaPredicted RBP8.52□□□□□ -1.05
RFC1-213ENST00000512275 FMNL3Q8IVF7 1028 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 SMC5Q8IY18 1101 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 NAT16Q8N8M0 369 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 SSH3Q8TE77 659 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 COG1Q8WTW3 980 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 G6PC3Q9BUM1 346 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 CABP5Q9NP86 173 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 CBLCQ9ULV8 474 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 COL4A1P02462 1669 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 SH3TC1Q8TE82 1336 aa8.52□□□□□ -1.05
RFC1-213ENST00000512275 NRXN2Q9P2S2 1712 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 LRP5O75197 1615 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 CARMIL3Q8ND23 1372 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 FKBP9O95302 570 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 PYGMP11217 842 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 GYS1P13807 737 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 ATP2A2P16615 1042 aaKnown RBP8.51□□□□□ -1.05
RFC1-213ENST00000512275 BCL6P41182 706 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 RGS3P49796 1198 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 GTF2A2P52657 109 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 MTX1Q13505 466 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 NFIXQ14938 502 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 SLC15A2Q16348 729 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 NFE2Q16621 373 aaPredicted RBP8.51□□□□□ -1.05
RFC1-213ENST00000512275 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
RFC1-213ENST00000512275 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 FKBP9P1Q75LS8 142 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 OTOP1Q7RTM1 612 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 KLHDC4Q8TBB5 520 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 GCC1Q96CN9 775 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 DCTPP1Q9H773 170 aa8.51□□□□□ -1.05
RFC1-213ENST00000512275 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
RFC1-213ENST00000512275 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
RFC1-213ENST00000512275 AK9Q5TCS8 1911 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 H7BY64 318 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 K7ESF4 209 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 GAS7O60861 476 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 SURF6O75683 361 aaKnown RBP8.5□□□□□ -1.05
RFC1-213ENST00000512275 RPL10P27635 214 aaKnown RBP8.5□□□□□ -1.05
RFC1-213ENST00000512275 DNM2P50570 870 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 NEK2P51955 445 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 IL2P60568 153 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 LACTBP83111 547 aaPredicted RBP8.5□□□□□ -1.05
RFC1-213ENST00000512275 OS9Q13438 667 aaPredicted RBP8.5□□□□□ -1.05
RFC1-213ENST00000512275 NBPF5PQ86XG9 351 aaPredicted RBP8.5□□□□□ -1.05
RFC1-213ENST00000512275 CNTD1Q8N815 330 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 ASB11Q8WXH4 323 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 MTMR8Q96EF0 704 aa8.5□□□□□ -1.05
RFC1-213ENST00000512275 HRASLS5Q96KN8 279 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms