RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 C7P10643 843 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 PHKA2P46019 1235 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 FAM189BP81408 668 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 EARS2Q5JPH6 523 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 TTC38Q5R3I4 469 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 NACC1Q96RE7 527 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 TMX1Q9H3N1 280 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 NSUN3Q9H649 340 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
PRDM2-214ENST00000505823 SMC3Q9UQE7 1217 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 A0A0C4DFX4 3053 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 TTC3P53804 2025 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 COL4A6Q14031 1691 aa13.37□□□□□ -0.27
PRDM2-214ENST00000505823 C9IYK1 514 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 LPXNO60711 386 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 ERLIN2O94905 339 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 SLITRK3O94933 977 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 LAG3P18627 525 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 MUTP22033 750 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 KRT17Q04695 432 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 EMC2Q15006 297 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 PAN2Q504Q3 1202 aaKnown RBP13.36□□□□□ -0.27
PRDM2-214ENST00000505823 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 HACE1Q8IYU2 909 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 MTMR9Q96QG7 549 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 KIF2CQ99661 725 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 HSD17B14Q9BPX1 270 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 DHX33Q9H6R0 707 aaKnown RBP13.36□□□□□ -0.27
PRDM2-214ENST00000505823 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
PRDM2-214ENST00000505823 PRRC2BQ5JSZ5 2229 aaKnown RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 A0A087WZ62 844 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 A0A0U1RQF3 1178 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 FAM205CA6NFA0 338 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 STBD1O95210 358 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 U2AF2P26368 475 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■■■□ 20.7
PRDM2-214ENST00000505823 PPM1AP35813 382 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 TECP42680 631 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 NPEPPSP55786 919 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 UBE3AQ05086 875 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 ZNF174Q15697 407 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 PDE12Q6L8Q7 609 aaKnown RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 LRRC43Q8N309 656 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 RNF169Q8NCN4 708 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 MCPH1Q8NEM0 835 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 TBC1D32Q96NH3 1257 aa13.35□□□□□ -0.27
PRDM2-214ENST00000505823 FDXACB1Q9BRP7 624 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 PIN4Q9Y237 131 aaKnown RBP13.35□□□□□ -0.27
PRDM2-214ENST00000505823 DTNBO60941 627 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 PDCP20941 246 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 POU5F1BQ06416 359 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 PDIA5Q14554 519 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 DSC3Q14574 896 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 GLB1LQ6UWU2 654 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 EP400NLQ6ZTU2 488 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 THNSL1Q8IYQ7 743 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 CNNM3Q8NE01 707 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
PRDM2-214ENST00000505823 SH2D3AQ9BRG2 576 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 TRAIPQ9BWF2 469 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 RC3H2Q9HBD1 1191 aaKnown RBP13.34□□□□□ -0.27
PRDM2-214ENST00000505823 UBN1Q9NPG3 1134 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 STK39Q9UEW8 545 aa13.34□□□□□ -0.27
PRDM2-214ENST00000505823 MRPL42Q9Y6G3 142 aaKnown RBP13.34□□□□□ -0.27
PRDM2-214ENST00000505823 TRANK1O15050 2925 aa13.33□□□□□ -0.27
PRDM2-214ENST00000505823 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 ARHGEF35A5YM69 484 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 RPA1P27694 616 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 AXLP30530 894 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 ALDH7A1P49419 539 aaKnown RBP13.33□□□□□ -0.28
PRDM2-214ENST00000505823 ST3GAL1Q11201 340 aa13.33□□□□□ -0.28
PRDM2-214ENST00000505823 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms