RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CD2APQ9Y5K6 639 aa5.31□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CLIP1P30622 1438 aa5.31□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PRAMEF22A3QJZ6 481 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CNOT4O95628 575 aaKnown RBP5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CD53P19397 219 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 BDNFP23560 247 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 POLD1P28340 1107 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 SDHAP31040 664 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 EPHB4P54760 987 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PPP2CBP62714 309 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PPP2CAP67775 309 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 USP10Q14694 798 aaKnown RBP5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 TTF1Q15361 905 aaPredicted RBP5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ZNF827Q17R98 1081 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 GLB1LQ6UWU2 654 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 DPP8Q6V1X1 898 aaPredicted RBP5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PCGF5Q86SE9 256 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 LOXL4Q96JB6 756 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 NAP1L5Q96NT1 182 aaPredicted RBP5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 MEGF9Q9H1U4 602 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ANAPC4Q9UJX5 808 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 RPS6KL1Q9Y6S9 549 aa5.3□□□□□ -1.56
PDLIM1P4-201ENST00000504327 GLI2P10070 1586 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 EPRSP07814 1512 aaKnown RBP5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 WDR7Q9Y4E6 1490 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PTPDC1A2A3K4 754 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 TRAF5O00463 557 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 EXOC5O00471 708 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 DVL2O14641 736 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 JMJD7P0C870 316 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ATF3P18847 181 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ECE1P42892 770 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ETV4P43268 484 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 KCNQ1P51787 676 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 KIF11P52732 1056 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CD83Q01151 205 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 LMOD3Q0VAK6 560 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 STILQ15468 1287 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CT47A1Q5JQC4 288 aaPredicted RBP5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 KANK2Q63ZY3 851 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 IFNL2Q8IZJ0 200 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PAF1Q8N7H5 531 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 WNK4Q96J92 1243 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 BTBD2Q9BX70 525 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 TMX4Q9H1E5 349 aaPredicted RBP5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 SMPD4Q9NXE4 827 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ASB1Q9Y576 335 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 SLC4A7Q9Y6M7 1214 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CEP162Q5TB80 1403 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 FMN1Q68DA7 1419 aa5.29□□□□□ -1.56
PDLIM1P4-201ENST00000504327 NPEPPSL1A6NEC2 478 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 NPHP1O15259 732 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 GPR42O15529 346 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CUTAO60888 179 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 RFPL3O75679 317 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 HMGCRP04035 888 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ADRB1P08588 477 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 MAN1A1P33908 653 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 SOX5P35711 763 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 RAPGEF1Q13905 1077 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ARHGAP44Q17R89 818 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 DALRD3Q5D0E6 543 aaKnown RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CDCA2Q69YH5 1023 aaPredicted RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CC2D1AQ6P1N0 951 aaPredicted RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 OTOP2Q7RTS6 562 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 RTN4RL1Q86UN2 441 aaPredicted RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 MYO1HQ8N1T3 1032 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 SLC39A13Q96H72 371 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ARPC5LQ9BPX5 153 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CARD11Q9BXL7 1154 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 ZDHHC5Q9C0B5 715 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 OR10A5Q9H207 317 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CABP5Q9NP86 173 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CDC42EP3Q9UKI2 254 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CASKIN1Q8WXD9 1431 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PCF11O94913 1555 aaKnown RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 LRRIQ1Q96JM4 1722 aa5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 CDK13Q14004 1512 aaKnown RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 PPRC1Q5VV67 1664 aaKnown RBP5.28□□□□□ -1.56
PDLIM1P4-201ENST00000504327 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CBX4O00257 560 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 KPNA6O60684 536 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FGAP02671 866 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FLT3P36888 993 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAGEA10P43363 369 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ADAM17P78536 824 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ICAM4Q14773 271 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF568Q3ZCX4 644 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CFAP100Q494V2 611 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SLFN13Q68D06 897 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 UBE2R2Q712K3 238 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 LARP4Q71RC2 724 aaKnown RBP eCLIP5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CXXC5Q7LFL8 322 aaKnown RBP5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CIR1Q86X95 450 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms