RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 SRGAP2CP0DJJ0 459 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
SSBP1-214ENST00000498107 KCNJ6P48051 423 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 SHHQ15465 462 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 OTOP2Q7RTS6 562 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 GPBP1Q86WP2 473 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 PDILTQ8N807 584 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 RNF149Q8NC42 400 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 VWCEQ96DN2 955 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 CHAMP1Q96JM3 812 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 FDXACB1Q9BRP7 624 aaPredicted RBP17.71■□□□□ 0.43
SSBP1-214ENST00000498107 RUSC1Q9BVN2 902 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 CDHR5Q9HBB8 845 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 PADI3Q9ULW8 664 aa17.71■□□□□ 0.43
SSBP1-214ENST00000498107 COLQQ9Y215 455 aaPredicted RBP17.71■□□□□ 0.43
SSBP1-214ENST00000498107 NOC2LQ9Y3T9 749 aaKnown RBP17.71■□□□□ 0.43
SSBP1-214ENST00000498107 ZBBXA8MT70 800 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 GLRA2P23416 452 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 CD52P31358 61 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 NAMPTP43490 491 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 NFX1Q12986 1120 aaKnown RBP17.7■□□□□ 0.42
SSBP1-214ENST00000498107 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
SSBP1-214ENST00000498107 MCM6Q14566 821 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 C9orf50Q5SZB4 431 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 ZBTB8OSQ8IWT0 167 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 ASAP3Q8TDY4 903 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 TMEM40Q8WWA1 233 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 NFKBIZQ9BYH8 718 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 C2orf40Q9H1Z8 148 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 AGO3Q9H9G7 860 aaKnown RBP17.7■□□□□ 0.42
SSBP1-214ENST00000498107 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 KCNH3Q9ULD8 1083 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 ODF2LQ9ULJ1 636 aa17.7■□□□□ 0.42
SSBP1-214ENST00000498107 LRRIQ4A6NIV6 560 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 HIP1RO75146 1068 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 PTENP60484 403 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 AMPD3Q01432 767 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 NCBP1Q09161 790 aaKnown RBP17.69■□□□□ 0.42
SSBP1-214ENST00000498107 DMP1Q13316 513 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-214ENST00000498107 CAPSQ13938 189 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 IFNLR1Q8IU57 520 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-214ENST00000498107 ZNF668Q96K58 619 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-214ENST00000498107 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 IFT122Q9HBG6 1241 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 GDPD2Q9HCC8 539 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 ERVK-5Q9HDB9 667 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-214ENST00000498107 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 ST3GAL5Q9UNP4 418 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 SLC4A7Q9Y6M7 1214 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 PHLPP2Q6ZVD8 1323 aa17.69■□□□□ 0.42
SSBP1-214ENST00000498107 POLR2DO15514 142 aaKnown RBP17.68■□□□□ 0.42
SSBP1-214ENST00000498107 AMHP03971 560 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 ZSCAN20P17040 1043 aaPredicted RBP17.68■□□□□ 0.42
SSBP1-214ENST00000498107 SMTNP53814 917 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 RASIP1Q5U651 963 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 CEP57L1Q8IYX8 460 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 DEPTORQ8TB45 409 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 PHOSPHO2Q8TCD6 241 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 MRPS27Q92552 414 aaKnown RBP17.68■□□□□ 0.42
SSBP1-214ENST00000498107 DHX58Q96C10 678 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 SLC9A7Q96T83 725 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 CHST12Q9NRB3 414 aa17.68■□□□□ 0.42
SSBP1-214ENST00000498107 LARSQ9P2J5 1176 aaKnown RBP17.68■□□□□ 0.42
SSBP1-214ENST00000498107 A0A087X0B3 334 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 FAM237AA0A1B0GTK4 181 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 TBCAO75347 108 aaKnown RBP17.67■□□□□ 0.42
SSBP1-214ENST00000498107 FAM13AO94988 1023 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 PFKFB1P16118 471 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 SCP2P22307 547 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 EFNA5P52803 228 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 E2F4Q16254 413 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 ARSHQ5FYA8 562 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 CATSPER4Q7RTX7 472 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 CCDC34Q96HJ3 373 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 OSBPL7Q9BZF2 842 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 MYH11P35749 1972 aa17.67■□□□□ 0.42
SSBP1-214ENST00000498107 MICAL3Q7RTP6 2002 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 DENND3A2RUS2 1198 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 H0YCG3 227 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 INO80B-WBP1J3KQ70 363 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 ERLIN2O94905 339 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 PLS3P13797 630 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 SYKP43405 635 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 WDR5P61964 334 aaKnown RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 RAD51AP2Q09MP3 1159 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 CDCA2Q69YH5 1023 aaPredicted RBP17.66■□□□□ 0.42
SSBP1-214ENST00000498107 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 SLC17A8Q8NDX2 589 aa17.66■□□□□ 0.42
SSBP1-214ENST00000498107 SPIRE2Q8WWL2 714 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms