RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FXR1P51114 621 aaKnown RBP eCLIP15.03■□□□□ -0
COL1A1-208ENST00000494334 SLC12A3P55017 1021 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 KRT85P78386 507 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 CAPSQ13938 189 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 AXDND1Q5T1B0 1012 aaPredicted RBP15.03■□□□□ -0
COL1A1-208ENST00000494334 TMCO2Q7Z6W1 182 aaPredicted RBP15.03■□□□□ -0
COL1A1-208ENST00000494334 RUSC1Q9BVN2 902 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 INO80BQ9C086 356 aaPredicted RBP15.03■□□□□ -0
COL1A1-208ENST00000494334 CCDC39Q9UFE4 941 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 PCDHA7Q9UN72 937 aa15.03■□□□□ -0
COL1A1-208ENST00000494334 MGEA5O60502 916 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 AMHP03971 560 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 SSBP05455 408 aaKnown RBP eCLIP15.02■□□□□ -0
COL1A1-208ENST00000494334 NCLP19338 710 aaKnown RBP15.02■□□□□ -0
COL1A1-208ENST00000494334 TXLNAP40222 546 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 PTENP60484 403 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 POU5F1BQ06416 359 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 TFDP1Q14186 410 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 SHC4Q6S5L8 630 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 FAM43BQ6ZT52 329 aaPredicted RBP15.02■□□□□ -0
COL1A1-208ENST00000494334 SRGAP1Q7Z6B7 1085 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 HERC6Q8IVU3 1022 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 MYOCDQ8IZQ8 938 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 RAD54LQ92698 747 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 TOP1MTQ969P6 601 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 PBX4Q9BYU1 374 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 TSPYL2Q9H2G4 693 aaPredicted RBP15.02■□□□□ -0
COL1A1-208ENST00000494334 MINDY3Q9H8M7 445 aa15.02■□□□□ -0
COL1A1-208ENST00000494334 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 SFPQP23246 707 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL1A1-208ENST00000494334 PBX2P40425 430 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 ME1P48163 572 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 RABGGTBP53611 331 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 MCM6Q14566 821 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 DSC3Q14574 896 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 NAALADL2Q58DX5 795 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 RRAGBQ5VZM2 374 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 IFNLR1Q8IU57 520 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-208ENST00000494334 LEO1Q8WVC0 666 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-208ENST00000494334 BSNDQ8WZ55 320 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 KIFAP3Q92845 792 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 ADAM2Q99965 735 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 PANK2Q9BZ23 570 aa15.01□□□□□ -0.01
COL1A1-208ENST00000494334 MYH15Q9Y2K3 1946 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 A0A087X0B3 334 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 HIP1RO75146 1068 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 GJB5O95377 273 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 GUCY2CP25092 1073 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 PHKA2P46019 1235 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 MAPK7Q13164 816 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 DHX8Q14562 1220 aaKnown RBP15□□□□□ -0.01
COL1A1-208ENST00000494334 ARSHQ5FYA8 562 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 FAM117BQ6P1L5 589 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 CCDC73Q6ZRK6 1079 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 CATSPER4Q7RTX7 472 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 DAW1Q8N136 415 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 LARP4BQ92615 738 aaKnown RBP15□□□□□ -0.01
COL1A1-208ENST00000494334 SPATA32Q96LK8 384 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 TIPINQ9BVW5 301 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 NFKBIZQ9BYH8 718 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 RGS18Q9NS28 235 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 KCND2Q9NZV8 630 aa15□□□□□ -0.01
COL1A1-208ENST00000494334 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
COL1A1-208ENST00000494334 YBX2Q9Y2T7 364 aaKnown RBP15□□□□□ -0.01
COL1A1-208ENST00000494334 NPHP3-ACAD11A0A0J9YXS1 232 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 DENND3A2RUS2 1198 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 LRRIQ4A6NIV6 560 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 UPP2O95045 317 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 MYOGP15173 224 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 ZSCAN20P17040 1043 aaPredicted RBP14.99□□□□□ -0.01
COL1A1-208ENST00000494334 DNAJB2P25686 324 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 MBTD1Q05BQ5 628 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 RAD51AP2Q09MP3 1159 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 CRIPAKQ8N1N5 446 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 PDILTQ8N807 584 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 SCAND2PQ9GZW5 306 aaPredicted RBP14.99□□□□□ -0.01
COL1A1-208ENST00000494334 CHST12Q9NRB3 414 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 STK17AQ9UEE5 414 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 MSRAQ9UJ68 235 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 RBM19Q9Y4C8 960 aaKnown RBP14.99□□□□□ -0.01
COL1A1-208ENST00000494334 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
COL1A1-208ENST00000494334 SFI1A8K8P3 1242 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 C9IYK1 514 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 INO80B-WBP1J3KQ70 363 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 TLL1O43897 1013 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 NAMPTP43490 491 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 FAM189BP81408 668 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
COL1A1-208ENST00000494334 PPP2R5AQ15172 486 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 RAB30Q15771 203 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 RESP18Q5W5W9 173 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 CDCA2Q69YH5 1023 aaPredicted RBP14.98□□□□□ -0.01
COL1A1-208ENST00000494334 ADALQ6DHV7 355 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 GPR153Q6NV75 609 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 SLC24A5Q71RS6 500 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 GPBP1Q86WP2 473 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 IFT74Q96LB3 600 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 DRC1Q96MC2 740 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 ZBED2Q9BTP6 218 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms