RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 KRBA1A5PL33 1030 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 GPR32O75388 356 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 FOSP01100 380 aaPredicted RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 DCNP07585 359 aaKnown RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 CALM1P0DP23 149 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CALM2P0DP24 149 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CALM3P0DP25 149 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 EIF4BP23588 611 aaKnown RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 ZNF76P36508 570 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CLCN4P51793 760 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 NLRP11P59045 1033 aaKnown RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 RNASELQ05823 741 aaKnown RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 HDAC1Q13547 482 aaPredicted RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 PTPN14Q15678 1187 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 ZNF528Q3MIS6 628 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CEP55Q53EZ4 464 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 KANK3Q6NY19 840 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 ABHD15Q6UXT9 468 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 DCLK2Q8N568 766 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CMASQ8NFW8 434 aaPredicted RBP8.68□□□□□ -1.02
PDPN-205ENST00000487038 PJA1Q8NG27 643 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 SHDQ96IW2 340 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 FAM167AQ96KS9 214 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 RTKNQ9BST9 563 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 OSBPL3Q9H4L5 887 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 EPS15L1Q9UBC2 864 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 SSX2IPQ9Y2D8 614 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CLUHO75153 1309 aa8.68□□□□□ -1.02
PDPN-205ENST00000487038 CCDC69A6NI79 296 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 LAMTOR5O43504 91 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 URODP06132 367 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 ADH1AP07327 375 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 CYP21A2P08686 494 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 ARP10275 920 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 RAB27AP51159 221 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 CLCN3P51790 818 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 SETQ01105 290 aaPredicted RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 ITGB3BPQ13352 177 aaPredicted RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 AP3B2Q13367 1082 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 VARS2Q5ST30 1063 aaKnown RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 SWSAP1Q6NVH7 229 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 CASC1Q6TDU7 716 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 GLB1LQ6UWU2 654 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 NFXL1Q6ZNB6 911 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 HEATR3Q7Z4Q2 680 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 ZNF598Q86UK7 904 aaKnown RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 SMAP1Q8IYB5 467 aaPredicted RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 SUMF1Q8NBK3 374 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 URGCPQ8TCY9 931 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 GPR152Q8TDT2 470 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 NLRP7Q8WX94 980 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 CHAMP1Q96JM3 812 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 ANO3Q9BYT9 981 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 BCO2Q9BYV7 579 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 RHOBTB2Q9BYZ6 727 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 SENP2Q9HC62 589 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 WDR6Q9NNW5 1121 aaKnown RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 MAN1C1Q9NR34 630 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 CHST12Q9NRB3 414 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 MRPL17Q9NRX2 175 aaKnown RBP8.67□□□□□ -1.02
PDPN-205ENST00000487038 FBXO4Q9UKT5 387 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
PDPN-205ENST00000487038 CACNA1IQ9P0X4 2223 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 ZBTB42B2RXF5 422 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 E7EWF7 191 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 INPPL1O15357 1258 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 PLEKHA8P1O95397 391 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 GLUD1P00367 558 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 PSAPP07602 524 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 ADRB1P08588 477 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 SFPQP23246 707 aaKnown RBP eCLIP8.66□□□□□ -1.02
PDPN-205ENST00000487038 MAGEA9P43362 315 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 PHKA2P46019 1235 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 GPC3P51654 580 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 ATXN1P54253 815 aaKnown RBP8.66□□□□□ -1.02
PDPN-205ENST00000487038 NAPAP54920 295 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 CDC42EP1Q00587 391 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 TWF2Q6IBS0 349 aaKnown RBP8.66□□□□□ -1.02
PDPN-205ENST00000487038 EFCAB12Q6NXP0 572 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 DCLRE1AQ6PJP8 1040 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 NIPA1Q7RTP0 329 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 TMEM173Q86WV6 379 aaPredicted RBP8.66□□□□□ -1.02
PDPN-205ENST00000487038 TMTC2Q8N394 836 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 SLC44A3Q8N4M1 653 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 ATRIPQ8WXE1 791 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 RSAD2Q8WXG1 361 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 PHKBQ93100 1093 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 KLHL5Q96PQ7 755 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 MTA3Q9BTC8 594 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 MYL10Q9BUA6 226 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 GBP3Q9H0R5 595 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 GLT8D2Q9H1C3 349 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 PIDD1Q9HB75 910 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 LY9Q9HBG7 655 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 SLC2A4RGQ9NR83 387 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 TBC1D22BQ9NU19 505 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 TBC1D13Q9NVG8 400 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms