RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 HOXA2O43364 376 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 NCK2O43639 380 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 MARCH6O60337 910 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-207ENST00000486975 GATMP50440 423 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 LEXMQ3ZCV2 418 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 TCEAL5Q5H9L2 206 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 NLRP7Q8WX94 980 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 PABPC5Q96DU9 382 aaKnown RBP16.14■□□□□ 0.17
CLDN11-207ENST00000486975 SCLT1Q96NL6 688 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 LXNQ9BS40 222 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 GCOM2Q9BZD3 368 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-207ENST00000486975 CHST12Q9NRB3 414 aa16.14■□□□□ 0.17
CLDN11-207ENST00000486975 SH2B1Q9NRF2 756 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-207ENST00000486975 WRAP73Q9P2S5 460 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-207ENST00000486975 GAS2O43903 313 aaKnown RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 ITGB1P05556 798 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 RFC5P40937 340 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 RBM25P49756 843 aaKnown RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 HMGN5P82970 282 aaKnown RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 CAMK1Q14012 370 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 CALCRLQ16602 461 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 PAN2Q504Q3 1202 aaKnown RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 NEK9Q8TD19 979 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 SLC7A3Q8WY07 619 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 RSPH1Q8WYR4 309 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 TRAIPQ9BWF2 469 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 INO80BQ9C086 356 aaPredicted RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 TMEM117Q9H0C3 514 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 ZSWIM4Q9H7M6 989 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 AAASQ9NRG9 546 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 DACT1Q9NYF0 836 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 SUCLA2Q9P2R7 463 aaPredicted RBP16.13■□□□□ 0.17
CLDN11-207ENST00000486975 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 REV3LO60673 3130 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
CLDN11-207ENST00000486975 A0A0U1RQF3 1178 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 C2orf72A6NCS6 295 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 TBKBP1A7MCY6 615 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 NEMFO60524 1076 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 LYPLA2O95372 231 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLDN11-207ENST00000486975 YWHABP31946 246 aaKnown RBP16.12■□□□□ 0.17
CLDN11-207ENST00000486975 NPEPPSP55786 919 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 UBE3AQ05086 875 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 ORC2Q13416 577 aaPredicted RBP16.12■□□□□ 0.17
CLDN11-207ENST00000486975 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLDN11-207ENST00000486975 CSPP1Q1MSJ5 1256 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 FAM102BQ5T8I3 360 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 NCAPH2Q6IBW4 605 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 OTUD6AQ7L8S5 288 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 SPPL3Q8TCT6 385 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 CEP170P1Q96L14 293 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 MTMR9Q96QG7 549 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 HSD17B14Q9BPX1 270 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 RGL1Q9NZL6 768 aa16.12■□□□□ 0.17
CLDN11-207ENST00000486975 KIAA1671Q9BY89 1806 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 A0A087WZ62 844 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 PPP1R37O75864 691 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 SLITRK3O94933 977 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 EOMESO95936 686 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 FGFR1P11362 822 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 KCNA5P22460 613 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 POLGP54098 1239 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 CTC1Q2NKJ3 1217 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 PUS10Q3MIT2 529 aaKnown RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 VARS2Q5ST30 1063 aaKnown RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 ZNF598Q86UK7 904 aaKnown RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 HS6ST3Q8IZP7 471 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 DYDC2Q96IM9 177 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 C8orf76Q96K31 380 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 ZNF668Q96K58 619 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 FDXACB1Q9BRP7 624 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 ALG13Q9NP73 1137 aaKnown RBP16.11■□□□□ 0.17
CLDN11-207ENST00000486975 RNF19AQ9NV58 838 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 PCDHB12Q9Y5F1 795 aa16.11■□□□□ 0.17
CLDN11-207ENST00000486975 FNDC1Q4ZHG4 1894 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-207ENST00000486975 WNT7AO00755 349 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 LAG3P18627 525 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 HYAL1Q12794 435 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 LRRC43Q8N309 656 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 FBXO18Q8NFZ0 1043 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-207ENST00000486975 PSPC1Q8WXF1 523 aaKnown RBP16.1■□□□□ 0.17
CLDN11-207ENST00000486975 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 NECAB3Q96P71 396 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-207ENST00000486975 CASD1Q96PB1 797 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 EIF2AK1Q9BQI3 630 aaKnown RBP16.1■□□□□ 0.17
CLDN11-207ENST00000486975 FOXP1Q9H334 677 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-207ENST00000486975 CWH43Q9H720 699 aa16.1■□□□□ 0.17
CLDN11-207ENST00000486975 IFT122Q9HBG6 1241 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms