RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 STAT5BP51692 787 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 POLGP54098 1239 aaPredicted RBP17.41■□□□□ 0.38
U2AF1-211ENST00000486519 MTMR1Q13613 665 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 UBXN2BQ14CS0 331 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 NONOQ15233 471 aaKnown RBP eCLIP17.41■□□□□ 0.38
U2AF1-211ENST00000486519 IFIT1BQ5T764 474 aaKnown RBP17.41■□□□□ 0.38
U2AF1-211ENST00000486519 BCO2Q9BYV7 579 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 AZI2Q9H6S1 392 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 SLC9A2Q9UBY0 812 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 GMEB2Q9UKD1 530 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 FAM170BA6NMN3 283 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 ZIC2O95409 532 aaPredicted RBP17.4■□□□□ 0.38
U2AF1-211ENST00000486519 GALTP07902 379 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 LAMP2P13473 410 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 SHC2P98077 582 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 GRM4Q14833 912 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 GET4Q7L5D6 327 aaPredicted RBP17.4■□□□□ 0.38
U2AF1-211ENST00000486519 PLPPR4Q7Z2D5 763 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 CMASQ8NFW8 434 aaPredicted RBP17.4■□□□□ 0.38
U2AF1-211ENST00000486519 FGF14Q92915 247 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 LPPQ93052 612 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 WDR81Q562E7 1941 aa17.4■□□□□ 0.38
U2AF1-211ENST00000486519 ZNF213O14771 459 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 TBC1D4O60343 1298 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 C22orf31O95567 290 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 SPATA31D3P0C874 917 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 ATP4AP20648 1035 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 SLC11A1P49279 550 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 GIT2Q14161 759 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 BMS1Q14692 1282 aaKnown RBP17.39■□□□□ 0.37
U2AF1-211ENST00000486519 ODR4Q5SWX8 454 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 PARM1Q6UWI2 310 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 SPATA31D4Q6ZUB0 917 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 EVI5LQ96CN4 794 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 JADE2Q9NQC1 790 aa17.39■□□□□ 0.37
U2AF1-211ENST00000486519 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
U2AF1-211ENST00000486519 CEP295Q9C0D2 2601 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 TDGF1P13385 188 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 TARSP26639 723 aaKnown RBP17.38■□□□□ 0.37
U2AF1-211ENST00000486519 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
U2AF1-211ENST00000486519 MLF2Q15773 248 aaPredicted RBP17.38■□□□□ 0.37
U2AF1-211ENST00000486519 UBE2SQ16763 222 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 PRR23CQ6ZRP0 262 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 SMG7Q92540 1137 aaKnown RBP17.38■□□□□ 0.37
U2AF1-211ENST00000486519 NXPE3Q969Y0 559 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 LTB4R2Q9NPC1 389 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 SEMA4GQ9NTN9 838 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 TBC1D13Q9NVG8 400 aa17.38■□□□□ 0.37
U2AF1-211ENST00000486519 MYH9P35579 1960 aaKnown RBP17.38■□□□□ 0.37
U2AF1-211ENST00000486519 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 PIK3CDO00329 1044 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 C2CD2LO14523 706 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 CSDE1O75534 798 aaKnown RBP17.37■□□□□ 0.37
U2AF1-211ENST00000486519 CCNE2O96020 404 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 MS4A1P11836 297 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 CLCN3P51790 818 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 FZD5Q13467 585 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 ZNF280BQ86YH2 543 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 CCDC60Q8IWA6 550 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-211ENST00000486519 CDHR1Q96JP9 859 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 GBP3Q9H0R5 595 aa17.37■□□□□ 0.37
U2AF1-211ENST00000486519 IGF2RP11717 2491 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 IGKV6D-21A0A0A0MT36 114 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 A0A0U1RQF3 1178 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 HBP1O60381 514 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 TAS1R1Q7RTX1 841 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 TRMT1LQ7Z2T5 733 aaKnown RBP17.36■□□□□ 0.37
U2AF1-211ENST00000486519 BORCS6Q96GS4 357 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 EMILIN2Q9BXX0 1053 aa17.36■□□□□ 0.37
U2AF1-211ENST00000486519 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
U2AF1-211ENST00000486519 GREB1Q4ZG55 1949 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 TEX28O15482 410 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 ATG7O95352 703 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
U2AF1-211ENST00000486519 AFF1P51825 1210 aaKnown RBP17.35■□□□□ 0.37
U2AF1-211ENST00000486519 NLRP11P59045 1033 aaKnown RBP17.35■□□□□ 0.37
U2AF1-211ENST00000486519 MTAPQ13126 283 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 SRSF5Q13243 272 aaKnown RBP17.35■□□□□ 0.37
U2AF1-211ENST00000486519 SLC44A4Q53GD3 710 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 STAMQ92783 540 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 CLDN23Q96B33 292 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 SHDQ96IW2 340 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 KCNH7Q9NS40 1196 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 RXFP3Q9NSD7 469 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 INPP5FQ9Y2H2 1132 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 NOTCH4Q99466 2003 aa17.35■□□□□ 0.37
U2AF1-211ENST00000486519 DDX39AO00148 427 aaKnown RBP17.34■□□□□ 0.37
U2AF1-211ENST00000486519 TM4SF5O14894 197 aa17.34■□□□□ 0.37
U2AF1-211ENST00000486519 DDHD2O94830 711 aa17.34■□□□□ 0.37
U2AF1-211ENST00000486519 COL1A2P08123 1366 aa17.34■□□□□ 0.37
U2AF1-211ENST00000486519 LAIR1Q6GTX8 287 aa17.34■□□□□ 0.37
U2AF1-211ENST00000486519 PRR23BQ6ZRT6 265 aa17.34■□□□□ 0.37
U2AF1-211ENST00000486519 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms