RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 DNAH12Q6ZR08 3092 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 A0A087WZ62 844 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
NUP50-216ENST00000486184 ZNF202O95125 648 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 CHRNA1P02708 482 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 IDEP14735 1019 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 CSF2RAP15509 400 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 ARL2P36404 184 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 AFMP43652 599 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 SMTNP53814 917 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
NUP50-216ENST00000486184 MGAT3Q09327 533 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 PAK2Q13177 524 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 KSR1Q8IVT5 923 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 ZBTB8OSQ8IWT0 167 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 USP38Q8NB14 1042 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 RNF149Q8NC42 400 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 DEPTORQ8TB45 409 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 ASAP3Q8TDY4 903 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 LRRC15Q8TF66 581 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 DDX12PQ92771 950 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 STAMQ92783 540 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 ZNF668Q96K58 619 aaPredicted RBP12.6□□□□□ -0.39
NUP50-216ENST00000486184 REEP2Q9BRK0 252 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 FDXACB1Q9BRP7 624 aaPredicted RBP12.6□□□□□ -0.39
NUP50-216ENST00000486184 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
NUP50-216ENST00000486184 LARSQ9P2J5 1176 aaKnown RBP12.6□□□□□ -0.39
NUP50-216ENST00000486184 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
NUP50-216ENST00000486184 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 NPHP3-ACAD11A0A0J9YXS1 232 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 H0YGN5 161 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 GADD45BO75293 160 aaPredicted RBP12.59□□□□□ -0.39
NUP50-216ENST00000486184 GPR32O75388 356 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 RPS6KA5O75582 802 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 PFKMP08237 780 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 GHRP10912 638 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 ACTN1P12814 892 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
NUP50-216ENST00000486184 GLRA2P23416 452 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 ITGB8P26012 769 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 NAMPTP43490 491 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 ASIC1P78348 528 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 CAPSQ13938 189 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 GIT2Q14161 759 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 LONRF3Q496Y0 759 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 KRBA2Q6ZNG9 492 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 CCDC65Q8IXS2 484 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 SEPT8Q92599 483 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 C2orf40Q9H1Z8 148 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 PARVGQ9HBI0 331 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 POLD4Q9HCU8 107 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 KBTBD4Q9NVX7 518 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
NUP50-216ENST00000486184 MYMKA6NI61 221 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 H0YCG3 227 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 INO80B-WBP1J3KQ70 363 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 GPR182O15218 404 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 ERLIN2O94905 339 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 MYL1P05976 194 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 PLS3P13797 630 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 DARSP14868 501 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 GAP43P17677 238 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 EIF4BP23588 611 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 MAGEA10P43363 369 aaPredicted RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 PEX3P56589 373 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 NCBP1Q09161 790 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 NFX1Q12986 1120 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 ARSHQ5FYA8 562 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 PSRC1Q6PGN9 363 aaPredicted RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 FMR1NBQ8N0W7 255 aaPredicted RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 APBB2Q92870 758 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 CCDC47Q96A33 483 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 IFIH1Q9BYX4 1025 aaKnown RBP12.58□□□□□ -0.4
NUP50-216ENST00000486184 ADAMTS10Q9H324 1103 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 KMT5AQ9NQR1 393 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 PHLPP2Q6ZVD8 1323 aa12.58□□□□□ -0.4
NUP50-216ENST00000486184 SFI1A8K8P3 1242 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 NBNO60934 754 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 LIG1P18858 919 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 CD52P31358 61 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 EFNA5P52803 228 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 POU5F1BQ06416 359 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 MAPK7Q13164 816 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 LPIN1Q14693 890 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 CATSPER4Q7RTX7 472 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms