RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 POU2F2P09086 479 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 PFKLP17858 780 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 EDNRBP24530 442 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 GPR15P49685 360 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 KIF23Q02241 960 aaPredicted RBP7.76□□□□□ -1.17
VPS50-212ENST00000476413 HLTFQ14527 1009 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS50-212ENST00000476413 GBX1Q14549 363 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 ATAT1Q5SQI0 421 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 CYB5RLQ6IPT4 315 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 CXXC5Q7LFL8 322 aaKnown RBP7.76□□□□□ -1.17
VPS50-212ENST00000476413 PPP1R14CQ8TAE6 165 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 NOL10Q9BSC4 688 aaKnown RBP7.76□□□□□ -1.17
VPS50-212ENST00000476413 ACE2Q9BYF1 805 aaPredicted RBP7.76□□□□□ -1.17
VPS50-212ENST00000476413 PCDH18Q9HCL0 1135 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 NMRK2Q9NPI5 230 aa7.76□□□□□ -1.17
VPS50-212ENST00000476413 DCP1AQ9NPI6 582 aaPredicted RBP7.76□□□□□ -1.17
VPS50-212ENST00000476413 DDX20Q9UHI6 824 aaKnown RBP7.76□□□□□ -1.17
VPS50-212ENST00000476413 N4BP3O15049 544 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 CUTAO60888 179 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 KNG1P01042 644 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 FOXO4P98177 505 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 GRM3Q14832 879 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 IFIT1BQ5T764 474 aaKnown RBP7.75□□□□□ -1.17
VPS50-212ENST00000476413 TMEM200BQ69YZ2 307 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 MIER2Q8N344 545 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 PRR18Q8N4B5 295 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 KYQ8NBH2 561 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 HPS3Q969F9 1004 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 TIFAQ96CG3 184 aa7.75□□□□□ -1.17
VPS50-212ENST00000476413 ERC2O15083 957 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 AP1G1O43747 822 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 SEMA7AO75326 666 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
VPS50-212ENST00000476413 LIMS1P48059 325 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 MALLQ13021 153 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 CCDC178Q5BJE1 867 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 PRR31Q5SQ13 230 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 SLC39A13Q96H72 371 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 CLIC6Q96NY7 704 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 PRDM11Q9NQV5 511 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 CHST12Q9NRB3 414 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 MAGEL2Q9UJ55 1249 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 LIMCH1Q9UPQ0 1083 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 IPPQ9Y573 584 aa7.74□□□□□ -1.17
VPS50-212ENST00000476413 OFD1O75665 1012 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 HSPA6P17066 643 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 PDCP20941 246 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 WASP42768 502 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 PPP3CAQ08209 521 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 DGKDQ16760 1214 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 GRAMD4Q6IC98 578 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 DPP8Q6V1X1 898 aaPredicted RBP7.73□□□□□ -1.17
VPS50-212ENST00000476413 TMEFF1Q8IYR6 380 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 HIST1H2AHQ96KK5 128 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 HIST1H2AJQ99878 128 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 DMRT3Q9NQL9 472 aa7.73□□□□□ -1.17
VPS50-212ENST00000476413 A6NNZ2 444 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 HTRA2O43464 458 aaPredicted RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 TMEM127O75204 238 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 KRT18P05783 430 aaKnown RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 ADCY8P40145 1251 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 MCAMP43121 646 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 MLLT6P55198 1093 aaPredicted RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 SMAD4Q13485 552 aaKnown RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 MLANAQ16655 118 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 UAP1L1Q3KQV9 507 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 BTNL9Q6UXG8 535 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 USP45Q70EL2 814 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 GLB1L3Q8NCI6 653 aaPredicted RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.72□□□□□ -1.17
VPS50-212ENST00000476413 DIS3LQ8TF46 1054 aaKnown RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 ZCCHC14Q8WYQ9 949 aaKnown RBP7.72□□□□□ -1.17
VPS50-212ENST00000476413 FATE1Q969F0 183 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 DYDC2Q96IM9 177 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 WRNIP1Q96S55 665 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 FAM53CQ9NYF3 392 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 CROTQ9UKG9 612 aa7.72□□□□□ -1.17
VPS50-212ENST00000476413 CHGBP05060 677 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 MYL1P05976 194 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 DLX2Q07687 328 aaPredicted RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 WDR72Q3MJ13 1102 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 C3orf36Q3SXR2 165 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 ARHGAP29Q52LW3 1261 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 SLC4A10Q6U841 1118 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 CCAR1Q8IX12 1150 aaKnown RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 TTLL6Q8N841 843 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 OR2I1PQ8NGU4 316 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 NRG4Q8WWG1 115 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 NKD2Q969F2 451 aaPredicted RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 ZBTB8AQ96BR9 441 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 ACO2Q99798 780 aaKnown RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 EPB41L4AQ9HCS5 686 aaPredicted RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 POLR3BQ9NW08 1133 aaPredicted RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 SPATA6Q9NWH7 488 aaPredicted RBP7.71□□□□□ -1.18
VPS50-212ENST00000476413 DNM3Q9UQ16 869 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 PTPN22Q9Y2R2 807 aa7.71□□□□□ -1.18
VPS50-212ENST00000476413 A0A0G2JNJ9 132 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 CCDC154A6NI56 674 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 LRRC10BA6NIK2 292 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 MAFGO15525 162 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms