RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 ZHX3Q9H4I2 956 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 GPRC5CQ9NQ84 441 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 MAPK8IP1Q9UQF2 711 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 SYNRGQ9UMZ2 1314 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 MCM3APO60318 1980 aa14.05□□□□□ -0.16
TRAF4-208ENST00000469529 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 TGFB1I1O43294 461 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 GCNT3O95395 438 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 INHAP05111 366 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 GLRA2P23416 452 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 KLRC1P26715 233 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 MARK3P27448 753 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 NMT1P30419 496 aaKnown RBP14.04□□□□□ -0.16
TRAF4-208ENST00000469529 PSEN2P49810 448 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 PEX3P56589 373 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 MFSD10Q14728 455 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 KIAA0753Q2KHM9 967 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 MARCH8Q5T0T0 291 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 LHX8Q68G74 356 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 KLHL10Q6JEL2 608 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 MTHFD1LQ6UB35 978 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 FILIP1Q7Z7B0 1213 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 SESTD1Q86VW0 696 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 IFNLR1Q8IU57 520 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-208ENST00000469529 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 SLC9A9Q8IVB4 645 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 GLIS3Q8NEA6 775 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
TRAF4-208ENST00000469529 CEP63Q96MT8 703 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 ACCSQ96QU6 501 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 TSG101Q99816 390 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 SEZ6LQ9BYH1 1024 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 POLR3FQ9H1D9 316 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-208ENST00000469529 POLD4Q9HCU8 107 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 HMX1Q9NP08 348 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-208ENST00000469529 XPNPEP3Q9NQH7 507 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
TRAF4-208ENST00000469529 TBC1D7Q9P0N9 293 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 CTNND2Q9UQB3 1225 aa14.04□□□□□ -0.16
TRAF4-208ENST00000469529 PRPF6O94906 941 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 GNA14O95837 355 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 RPLP2P05387 115 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 C6orf222P0C671 652 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 ZNF286BP0CG31 522 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 MYBP10242 640 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 GNAT1P11488 350 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 RPL13P26373 211 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 EEF1GP26641 437 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 TMOD1P28289 359 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 CNGA1P29973 690 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 EFNA5P52803 228 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 MARSP56192 900 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 STX17P56962 302 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 PPFIA1Q13136 1202 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 MTFR1Q15390 333 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 GRIK4Q16099 956 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 EFCAB12Q6NXP0 572 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 TRMT1LQ7Z2T5 733 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 MAP4K3Q8IVH8 894 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 PSPC1Q8WXF1 523 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 BSNDQ8WZ55 320 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 TMEM143Q96AN5 459 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 KMT5AQ9NQR1 393 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 DMAC2Q9NW81 257 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 LIMA1Q9UHB6 759 aaKnown RBP14.03□□□□□ -0.16
TRAF4-208ENST00000469529 TBX20Q9UMR3 447 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 EXOC7Q9UPT5 735 aa14.03□□□□□ -0.16
TRAF4-208ENST00000469529 SMIM35A0A1B0GVV1 85 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 CALUO43852 315 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 PIGRP01833 764 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 CAPN2P17655 700 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 BEX3Q00994 111 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 PTPN11Q06124 597 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 ZC2HC1CQ53FD0 456 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 CDCA2Q69YH5 1023 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 LRRC55Q6ZSA7 311 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 APTXQ7Z2E3 356 aaKnown RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 RNF180Q86T96 592 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 FAM114A1Q8IWE2 563 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 NME8Q8N427 588 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 CSGALNACT2Q8N6G5 542 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 ASAP3Q8TDY4 903 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 ANP32BQ92688 251 aaKnown RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 LENG1Q96BZ8 264 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 MRFAP1L1Q96HT8 127 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 PDLIM2Q96JY6 352 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 SRRTQ9BXP5 876 aaKnown RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 GBP3Q9H0R5 595 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 C2orf40Q9H1Z8 148 aa14.02□□□□□ -0.17
TRAF4-208ENST00000469529 SAMSN1Q9NSI8 373 aaKnown RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 SUCLA2Q9P2R7 463 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-208ENST00000469529 PDE4DIPQ5VU43 2346 aa14.01□□□□□ -0.17
TRAF4-208ENST00000469529 TRIM49BA6NDI0 452 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms