RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 C4AP0C0L4 1744 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 MARK3P27448 753 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 PEX3P56589 373 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
USP11-206ENST00000469080 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 ATG4CQ96DT6 458 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 FESP07332 822 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 EPB41P11171 864 aaKnown RBP13.34□□□□□ -0.27
USP11-206ENST00000469080 TMEM62Q0P6H9 643 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
USP11-206ENST00000469080 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
USP11-206ENST00000469080 RMDN3Q96TC7 470 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 C7orf25Q9BPX7 421 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 LXNQ9BS40 222 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 DEFB129Q9H1M3 183 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 MYH8P13535 1937 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 M0R2N6 131 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 CUL3Q13618 768 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 ASIC2Q16515 512 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 KCTD16Q68DU8 428 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 CCDC70Q6NSX1 233 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 SLFN12Q8IYM2 578 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 TAAR1Q96RJ0 339 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 PACSIN1Q9BY11 444 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 MRPL11Q9Y3B7 192 aaKnown RBP13.34□□□□□ -0.27
USP11-206ENST00000469080 SLC16A4O15374 487 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 CALCAP01258 141 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 PAFAH1B1P43034 410 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 ROR2Q01974 943 aaKnown RBP13.34□□□□□ -0.27
USP11-206ENST00000469080 EXOC3L4Q17RC7 722 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 GADL1Q6ZQY3 521 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 DAGLBQ8NCG7 672 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 TAF4BQ92750 862 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 LRRC27Q9C0I9 530 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
USP11-206ENST00000469080 L3MBTL1Q9Y468 752 aa13.34□□□□□ -0.27
USP11-206ENST00000469080 RNF8O76064 485 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 ASNSP08243 561 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 FERP16591 822 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 CA8P35219 290 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 CTCFP49711 727 aaPredicted RBP13.33□□□□□ -0.27
USP11-206ENST00000469080 GUCY2FP51841 1108 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 POLE2P56282 527 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 MXRA7P84157 204 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.27
USP11-206ENST00000469080 MMS19Q96T76 1030 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 GCNT4Q9P109 453 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 HACL1Q9UJ83 578 aa13.33□□□□□ -0.27
USP11-206ENST00000469080 TNRC6CQ9HCJ0 1690 aaKnown RBP13.33□□□□□ -0.28
USP11-206ENST00000469080 THSD7AQ9UPZ6 1657 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 SMNDC1O75940 238 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP11-206ENST00000469080 BAATQ14032 418 aaPredicted RBP13.33□□□□□ -0.28
USP11-206ENST00000469080 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 HIBCHQ6NVY1 386 aaPredicted RBP13.33□□□□□ -0.28
USP11-206ENST00000469080 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 MYH10P35580 1976 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 GCLMP48507 274 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 AARSP49588 968 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP11-206ENST00000469080 PDIA5Q14554 519 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
USP11-206ENST00000469080 WNK4Q96J92 1243 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 DNAAF2Q9NVR5 837 aaKnown RBP13.33□□□□□ -0.28
USP11-206ENST00000469080 PCDHA13Q9Y5I0 950 aa13.33□□□□□ -0.28
USP11-206ENST00000469080 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 SMIM23A6NLE4 172 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 CEP104O60308 925 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 ANP32DO95626 131 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 CD151P48509 253 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 SEC24CP53992 1094 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 PPP1R7Q15435 360 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 CEP55Q53EZ4 464 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 MOB2Q70IA6 237 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 COG1Q8WTW3 980 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 GORASP1Q9BQQ3 440 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 WDR18Q9BV38 432 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 TEKT3Q9BXF9 490 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 NOD2Q9HC29 1040 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 FRMD4BQ9Y2L6 1034 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 CLTAP09496 248 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 OSTNP61366 133 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
USP11-206ENST00000469080 MPP3Q13368 585 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 C2CD6Q53TS8 623 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 WDR59Q6PJI9 974 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
USP11-206ENST00000469080 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
USP11-206ENST00000469080 FAM186BQ8IYM0 893 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms