RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 LIG1P18858 919 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 CCL23P55773 120 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 CAPSQ13938 189 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 KIZQ2M2Z5 673 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 FBXO47Q5MNV8 452 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 NLRP7Q8WX94 980 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 PAGE5Q96GU1 130 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 INO80BQ9C086 356 aaPredicted RBP17.7■□□□□ 0.42
GPC1-207ENST00000466624 LARSQ9P2J5 1176 aaKnown RBP17.7■□□□□ 0.42
GPC1-207ENST00000466624 PDE4DIPQ5VU43 2346 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 A0A087WZ62 844 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 FAM13AO94988 1023 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PFKMP08237 780 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PLS3P13797 630 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 DARSP14868 501 aaKnown RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 SCP2P22307 547 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PHKA2P46019 1235 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PTENP60484 403 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 DMP1Q13316 513 aaPredicted RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 MBTPS1Q14703 1052 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PCBP1Q15365 356 aaKnown RBP eCLIP17.69■□□□□ 0.42
GPC1-207ENST00000466624 ODR4Q5SWX8 454 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 CDCA2Q69YH5 1023 aaPredicted RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 DYMQ7RTS9 669 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 SRGAP1Q7Z6B7 1085 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 KSR1Q8IVT5 923 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 RNF149Q8NC42 400 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 SPIRE2Q8WWL2 714 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 BSNDQ8WZ55 320 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 KCNN1Q92952 543 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 SCLYQ96I15 445 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 NLRP4Q96MN2 994 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 OSMRQ99650 979 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 FDXACB1Q9BRP7 624 aaPredicted RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 NTPCRQ9BSD7 190 aaKnown RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 GCOM2Q9BZD3 368 aaPredicted RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 IFT122Q9HBG6 1241 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 SEL1LQ9UBV2 794 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
GPC1-207ENST00000466624 TET1Q8NFU7 2136 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 PHLPP2Q6ZVD8 1323 aa17.69■□□□□ 0.42
GPC1-207ENST00000466624 GTPBP6O43824 516 aaPredicted RBP17.68■□□□□ 0.42
GPC1-207ENST00000466624 KINO60870 393 aaKnown RBP17.68■□□□□ 0.42
GPC1-207ENST00000466624 NBNO60934 754 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 SYN1P17600 705 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 GAP43P17677 238 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 EIF4BP23588 611 aaKnown RBP17.68■□□□□ 0.42
GPC1-207ENST00000466624 MCM4P33991 863 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 AFMP43652 599 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
GPC1-207ENST00000466624 PPIGQ13427 754 aaKnown RBP eCLIP17.68■□□□□ 0.42
GPC1-207ENST00000466624 GPNMBQ14956 572 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 TSHZ1Q6ZSZ6 1077 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 SLC17A8Q8NDX2 589 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 STAMQ92783 540 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 BADQ92934 168 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 C2orf40Q9H1Z8 148 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 CDHR5Q9HBB8 845 aa17.68■□□□□ 0.42
GPC1-207ENST00000466624 PVALEFA0A1B0GWK0 134 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 H0YCG3 227 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 SRGAP2CP0DJJ0 459 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
GPC1-207ENST00000466624 NPTX2P47972 431 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 SMTNP53814 917 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 PEX3P56589 373 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 FPGSQ05932 587 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 LPIN1Q14693 890 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 UNC13DQ70J99 1090 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 ZBTB8OSQ8IWT0 167 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 RPUSD2Q8IZ73 545 aaKnown RBP17.67■□□□□ 0.42
GPC1-207ENST00000466624 TMEM40Q8WWA1 233 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 PPP1R16BQ96T49 567 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 LBHD1Q9BQE6 289 aaPredicted RBP17.67■□□□□ 0.42
GPC1-207ENST00000466624 OLFML3Q9NRN5 406 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 HOOK1Q9UJC3 728 aaKnown RBP17.67■□□□□ 0.42
GPC1-207ENST00000466624 GINS2Q9Y248 185 aa17.67■□□□□ 0.42
GPC1-207ENST00000466624 TNRC18O15417 2968 aaPredicted RBP17.67■□□□□ 0.42
GPC1-207ENST00000466624 MICAL3Q7RTP6 2002 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 SFI1A8K8P3 1242 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 GPR182O15218 404 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 RPS6KA5O75582 802 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 GHRP10912 638 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 CSF2RAP15509 400 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 SFPQP23246 707 aaKnown RBP eCLIP17.66■□□□□ 0.42
GPC1-207ENST00000466624 ABCD1P33897 745 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 EFNA5P52803 228 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 NCKAP1LP55160 1127 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 ASIC1P78348 528 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
GPC1-207ENST00000466624 CUL4BQ13620 913 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 POSTNQ15063 836 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 PLEKHG4Q58EX7 1191 aa17.66■□□□□ 0.42
GPC1-207ENST00000466624 GRAMD1CQ8IYS0 662 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms