RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 KSR1Q8IVT5 923 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 TPH2Q8IWU9 490 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 LRRC43Q8N309 656 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 UHRF1Q96T88 793 aaPredicted RBP11.36□□□□□ -0.59
SF3A3-204ENST00000462258 MTRQ99707 1265 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
SF3A3-204ENST00000462258 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 DACT1Q9NYF0 836 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
SF3A3-204ENST00000462258 PIN4Q9Y237 131 aaKnown RBP11.36□□□□□ -0.59
SF3A3-204ENST00000462258 MYO7AQ13402 2215 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 SLITRK3O94933 977 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 LYPLA2O95372 231 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 ITGB1P05556 798 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 OR52Z1P0C646 297 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 TRAPPC10P48553 1259 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 FAM189BP81408 668 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 CATSPER4Q7RTX7 472 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 ABI1Q8IZP0 508 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 KLHL23Q8NBE8 558 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 RNF169Q8NCN4 708 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 TCP11Q8WWU5 503 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 TMEM143Q96AN5 459 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 TMEM117Q9H0C3 514 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 ALG13Q9NP73 1137 aaKnown RBP11.35□□□□□ -0.59
SF3A3-204ENST00000462258 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 RNF19AQ9NV58 838 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 NOL7Q9UMY1 257 aaKnown RBP11.35□□□□□ -0.59
SF3A3-204ENST00000462258 PLAGL2Q9UPG8 496 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 NCOR1O75376 2440 aa11.35□□□□□ -0.59
SF3A3-204ENST00000462258 A0A0U1RQF3 1178 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 ZBTB39O15060 712 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
SF3A3-204ENST00000462258 BMP1P13497 986 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 ATF7P17544 494 aaPredicted RBP11.34□□□□□ -0.59
SF3A3-204ENST00000462258 LAG3P18627 525 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 KCNA5P22460 613 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 RARRES1P49788 294 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 LAMTOR4Q0VGL1 99 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 NBR1Q14596 966 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 ZNF174Q15697 407 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 TWF2Q6IBS0 349 aaKnown RBP11.34□□□□□ -0.59
SF3A3-204ENST00000462258 ZNF598Q86UK7 904 aaKnown RBP11.34□□□□□ -0.59
SF3A3-204ENST00000462258 FERMT3Q86UX7 667 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 COLGALT1Q8NBJ5 622 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 PRPF31Q8WWY3 499 aaKnown RBP11.34□□□□□ -0.59
SF3A3-204ENST00000462258 TMX3Q96JJ7 454 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 CASD1Q96PB1 797 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 XPNPEP1Q9NQW7 623 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 CHST12Q9NRB3 414 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 ANKEF1Q9NU02 776 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 AGPAT5Q9NUQ2 364 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 PCDHB12Q9Y5F1 795 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 BDP1A6H8Y1 2624 aa11.34□□□□□ -0.59
SF3A3-204ENST00000462258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.33□□□□□ -0.6
SF3A3-204ENST00000462258 TNFRSF10AO00220 468 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 USO1O60763 962 aaKnown RBP11.33□□□□□ -0.6
SF3A3-204ENST00000462258 MED24O75448 989 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 DGAT1O75907 488 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 SRGAP2CP0DJJ0 459 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 DNAJB1P25685 340 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.69e-8■■■■□ 19.9
SF3A3-204ENST00000462258 TECP42680 631 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 PHKA2P46019 1235 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 MCM2P49736 904 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 RAB27AP51159 221 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 CAMK1Q14012 370 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 SRGAP1Q7Z6B7 1085 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 THNSL1Q8IYQ7 743 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 RNF149Q8NC42 400 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 ERMNQ8TAM6 284 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 SPPL3Q8TCT6 385 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 HELQQ8TDG4 1101 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 PIGOQ8TEQ8 1089 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 PPP2R3CQ969Q6 453 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 PABPC5Q96DU9 382 aaKnown RBP11.33□□□□□ -0.6
SF3A3-204ENST00000462258 NECAB3Q96P71 396 aaPredicted RBP11.33□□□□□ -0.6
SF3A3-204ENST00000462258 MRPL9Q9BYD2 267 aaKnown RBP11.33□□□□□ -0.6
SF3A3-204ENST00000462258 CWH43Q9H720 699 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 FAM105AQ9NUU6 356 aa11.33□□□□□ -0.6
SF3A3-204ENST00000462258 TYW1Q9NV66 732 aaKnown RBP11.33□□□□□ -0.6
SF3A3-204ENST00000462258 ASAP2O43150 1006 aa11.32□□□□□ -0.6
SF3A3-204ENST00000462258 FGF18O76093 207 aa11.32□□□□□ -0.6
SF3A3-204ENST00000462258 ERLIN2O94905 339 aa11.32□□□□□ -0.6
SF3A3-204ENST00000462258 EOMESO95936 686 aa11.32□□□□□ -0.6
SF3A3-204ENST00000462258 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
SF3A3-204ENST00000462258 SKIP12755 728 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms