RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FAM129CQ86XR2 697 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 TSPEARQ8WU66 669 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 FAM84AQ96KN4 292 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 NOB1Q9ULX3 412 aaKnown RBP5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 A0A0G2JNJ9 132 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 KIF3BO15066 747 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 NDUFS2O75306 463 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZRANB2O95218 330 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 RPL13P26373 211 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 IL13P35225 146 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADCY8P40145 1251 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 MLLT6P55198 1093 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADKP55263 362 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 CAP1Q01518 475 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 MLC1Q15049 377 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 CNKSR3Q6P9H4 555 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 TRMT10BQ6PF06 316 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 OTOP2Q7RTS6 562 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZCCHC14Q8WYQ9 949 aaKnown RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 FATE1Q969F0 183 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 DYDC2Q96IM9 177 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 PPP1R16BQ96T49 567 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 ACE2Q9BYF1 805 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 CSRNP2Q9H175 543 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 POLR3BQ9NW08 1133 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 SPATA6Q9NWH7 488 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 SAE1Q9UBE0 346 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 Q9UFV3 132 aa5.7□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6CA6NDK9 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6BA6NDN3 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6DP0CG33 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZNF28P17035 718 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ATF3P18847 181 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 POLD1P28340 1107 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 NRG3P56975 720 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 CDK17Q00537 523 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GTF2H3Q13889 308 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GAREM2Q75VX8 874 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 SAPCD2Q86UD0 394 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GLB1L2Q8IW92 636 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 TPH2Q8IWU9 490 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 MIER2Q8N344 545 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 PAWRQ96IZ0 340 aaKnown RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 PWWP2AQ96N64 755 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 AIFM3Q96NN9 605 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLC2A13Q96QE2 648 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 EPB41L4AQ9HCS5 686 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 GOLGA6AQ9NYA3 693 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 EVLQ9UI08 416 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 TUBD1Q9UJT1 453 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 CNOT6Q9ULM6 557 aaKnown RBP5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 FANCIQ9NVI1 1328 aa5.69□□□□□ -1.5
HMGB1P16-201ENST00000447155 TCAF2A6NFQ2 919 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 RFXAPO00287 272 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 KLHL18O94889 574 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 PI3P19957 117 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 AKAP5P24588 427 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 ETV4P43268 484 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLC16A1P53985 500 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 ANTXR2P58335 489 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 KIF23Q02241 960 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 MALLQ13021 153 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 TOP3AQ13472 1001 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 TCIRG1Q13488 830 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 SSPNQ14714 243 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 EIF4HQ15056 248 aaKnown RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 MAN2A1Q16706 1144 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 RRP12Q5JTH9 1297 aaKnown RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 BTNL9Q6UXG8 535 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 ATG14Q6ZNE5 492 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 C14orf80Q86SX3 495 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 IFNL2Q8IZJ0 200 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 BCL6BQ8N143 479 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 THEMISQ8N1K5 641 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 PPP1R14CQ8TAE6 165 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 TTC8Q8TAM2 541 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 L2HGDHQ9H9P8 463 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 NTMQ9P121 344 aa5.68□□□□□ -1.5
HMGB1P16-201ENST00000447155 EEA1Q15075 1411 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 A0A0A6YYK5 440 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 PRC1O43663 620 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 CCT2P78371 535 aaKnown RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 DLX2Q07687 328 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 ADRM1Q16186 407 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 GFOD2Q3B7J2 385 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 MUM1L1Q5H9M0 696 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 LMBR1LQ6UX01 489 aa5.67□□□□□ -1.5
HMGB1P16-201ENST00000447155 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms