RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TTLL4Q14679 1199 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 ARMC3Q5W041 872 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 PHLDB2Q86SQ0 1253 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 MED15Q96RN5 788 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 RPS6KC1Q96S38 1066 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 EPB41L5Q9HCM4 733 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 KRIT1O00522 736 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 DYNC1LI2O43237 492 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-210ENST00000444502 MYBP10242 640 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 BACE1P56817 501 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 MYL7Q01449 175 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 KCTD16Q68DU8 428 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 SCARA5Q6ZMJ2 495 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CATSPER4Q7RTX7 472 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 SPDL1Q96EA4 605 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 COL1A1P02452 1464 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-210ENST00000444502 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 H0YCG3 227 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 P4HBP07237 508 aaKnown RBP11.43□□□□□ -0.58
TOP3B-210ENST00000444502 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 ZNF394Q53GI3 561 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CCDC121Q6ZUS5 278 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CATSPER3Q86XQ3 398 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 ZBTB10Q96DT7 871 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 BLOC1S4Q9NUP1 217 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 PCDHA10Q9Y5I2 948 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CHUKO15111 745 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 HEXIM1O94992 359 aaKnown RBP11.43□□□□□ -0.58
TOP3B-210ENST00000444502 SLC9A1P19634 815 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 PLA2G4FQ68DD2 849 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 PDXDC1Q6P996 788 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 C4orf32Q8N8J7 132 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CCDC26Q8TAB7 109 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-210ENST00000444502 PSD3Q9NYI0 1048 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 CEP72Q9P209 647 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 AGTPBP1Q9UPW5 1226 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 ABCC6O95255 1503 aa11.43□□□□□ -0.58
TOP3B-210ENST00000444502 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 C6orf222P0C671 652 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 JAK3P52333 1124 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 PSMC6P62333 389 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 PAK2Q13177 524 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 DGKZQ13574 1117 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 ZC2HC1CQ53FD0 456 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 C7orf31Q8N865 590 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 SPATA20Q8TB22 786 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 SYNJ2BP-COX16A0A087WUM0 186 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 ESYT3A0FGR9 886 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 CYP11B2P19099 503 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 MXI1P50539 228 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 NPEPPSP55786 919 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 LACTBP83111 547 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 APBA1Q02410 837 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 ABI1Q8IZP0 508 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 SAAL1Q96ER3 474 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 TACO1Q9BSH4 297 aaKnown RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 CAPS2Q9BXY5 557 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 NACA2Q9H009 215 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 KLRC4O43908 158 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 BUB1BO60566 1050 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 ARHGEF6Q15052 776 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 TRPM4Q8TD43 1214 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 SYT17Q9BSW7 474 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 MSTO1Q9BUK6 570 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 AP1M1Q9BXS5 423 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 UBE2TQ9NPD8 197 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 EHD2Q9NZN4 543 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 TMX2Q9Y320 296 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 TMEM62Q0P6H9 643 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 GPC2Q8N158 579 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 ARMC2Q8NEN0 867 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 FAM193BQ96PV7 902 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 YIPF3Q9GZM5 350 aa11.42□□□□□ -0.58
TOP3B-210ENST00000444502 GBA2Q9HCG7 927 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-210ENST00000444502 GAKO14976 1311 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 AP1G2O75843 785 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 GCLMP48507 274 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 CENPPQ6IPU0 288 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 B4GALNT4Q76KP1 1039 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 DNAAF5Q86Y56 855 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 UHMK1Q8TAS1 419 aaKnown RBP11.41□□□□□ -0.58
TOP3B-210ENST00000444502 TMEM143Q96AN5 459 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 NT5C1BQ96P26 610 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 KIF9Q9HAQ2 790 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 FDX1P10109 184 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 STAT5BP51692 787 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 PSMC5P62195 406 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 IFT88Q13099 833 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 MESDQ14696 234 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 SEL1L2Q5TEA6 688 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms