RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 MXD4Q14582 209 aaPredicted RBP17.47■□□□□ 0.39
ACTB-206ENST00000443528 MAEAQ7L5Y9 396 aa17.47■□□□□ 0.39
ACTB-206ENST00000443528 RNF149Q8NC42 400 aa17.47■□□□□ 0.39
ACTB-206ENST00000443528 AK8Q96MA6 479 aa17.47■□□□□ 0.39
ACTB-206ENST00000443528 INO80BQ9C086 356 aaPredicted RBP17.47■□□□□ 0.39
ACTB-206ENST00000443528 POLR3FQ9H1D9 316 aaPredicted RBP17.47■□□□□ 0.39
ACTB-206ENST00000443528 RC3H2Q9HBD1 1191 aaKnown RBP17.47■□□□□ 0.39
ACTB-206ENST00000443528 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
ACTB-206ENST00000443528 DNM3Q9UQ16 869 aa17.47■□□□□ 0.39
ACTB-206ENST00000443528 LINC01553A4QN01 128 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 LONP1P36776 959 aaKnown RBP17.46■□□□□ 0.39
ACTB-206ENST00000443528 FAM189BP81408 668 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 POU5F1BQ06416 359 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 CAPSQ13938 189 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 SLC24A5Q71RS6 500 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 CABP7Q86V35 215 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 NPAS4Q8IUM7 802 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 MCPH1Q8NEM0 835 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 MYLIPQ8WY64 445 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
ACTB-206ENST00000443528 YME1L1Q96TA2 773 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 PLIN2Q99541 437 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 PRDM12Q9H4Q4 367 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 CERS4Q9HA82 394 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 C1orf112Q9NSG2 853 aa17.46■□□□□ 0.39
ACTB-206ENST00000443528 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 TTC3P53804 2025 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 DGKIO75912 1065 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 F13A1P00488 732 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 SFPQP23246 707 aaKnown RBP eCLIP17.45■□□□□ 0.38
ACTB-206ENST00000443528 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
ACTB-206ENST00000443528 PTENP60484 403 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 SLC39A14Q15043 492 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
ACTB-206ENST00000443528 TMEM119Q4V9L6 283 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 FAM102BQ5T8I3 360 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 IFNLR1Q8IU57 520 aaPredicted RBP17.45■□□□□ 0.38
ACTB-206ENST00000443528 NT5C3AQ9H0P0 336 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 CSRNP2Q9H175 543 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 POLD4Q9HCU8 107 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 SRPRBQ9Y5M8 271 aaKnown RBP17.45■□□□□ 0.38
ACTB-206ENST00000443528 MORC2Q9Y6X9 1032 aaPredicted RBP17.45■□□□□ 0.38
ACTB-206ENST00000443528 CDH23Q9H251 3354 aa17.45■□□□□ 0.38
ACTB-206ENST00000443528 EPOPA6NHQ4 379 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 STAG3L1P0CL83 205 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 ZSCAN20P17040 1043 aaPredicted RBP17.44■□□□□ 0.38
ACTB-206ENST00000443528 PHKA2P46019 1235 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 TFDP1Q14186 410 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 SPECC1Q5M775 1068 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 CATSPER4Q7RTX7 472 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 LRRC15Q8TF66 581 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 BSNDQ8WZ55 320 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 CLIC6Q96NY7 704 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 CHST12Q9NRB3 414 aa17.44■□□□□ 0.38
ACTB-206ENST00000443528 TFIP11Q9UBB9 837 aaKnown RBP17.44■□□□□ 0.38
ACTB-206ENST00000443528 SLC26A4O43511 780 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 LINC00271P0C7V0 271 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 IBSPP21815 317 aaPredicted RBP17.43■□□□□ 0.38
ACTB-206ENST00000443528 UBA7P41226 1012 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 GATMP50440 423 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 ERVK-21P61565 698 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 RINT1Q6NUQ1 792 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 USP49Q70CQ1 688 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 LINC00301Q8NCQ3 95 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 EPSTI1Q96J88 318 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
ACTB-206ENST00000443528 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 NFKBIZQ9BYH8 718 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 ELAC1Q9H777 363 aaKnown RBP17.43■□□□□ 0.38
ACTB-206ENST00000443528 AGPAT5Q9NUQ2 364 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 LRFN2Q9ULH4 789 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 PIN4Q9Y237 131 aaKnown RBP17.43■□□□□ 0.38
ACTB-206ENST00000443528 STXBP5LQ9Y2K9 1186 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 ZDHHC9Q9Y397 364 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 PCDHB7Q9Y5E2 793 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
ACTB-206ENST00000443528 A0A0U1RQF3 1178 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 RFXAPO00287 272 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 HOXA11P31270 313 aaPredicted RBP17.42■□□□□ 0.38
ACTB-206ENST00000443528 SLC12A3P55017 1021 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 MBTD1Q05BQ5 628 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 ADGRE1Q14246 886 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 KARSQ15046 597 aaKnown RBP17.42■□□□□ 0.38
ACTB-206ENST00000443528 AMHR2Q16671 573 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 FOXD4L6Q3SYB3 417 aaPredicted RBP17.42■□□□□ 0.38
ACTB-206ENST00000443528 FOXD4L3Q6VB84 417 aaPredicted RBP17.42■□□□□ 0.38
ACTB-206ENST00000443528 ECHDC2Q86YB7 292 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 DAW1Q8N136 415 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 SYT2Q8N9I0 419 aaPredicted RBP17.42■□□□□ 0.38
ACTB-206ENST00000443528 ARNTL2Q8WYA1 636 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 CDK5RAP3Q96JB5 506 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 TGS1Q96RS0 853 aaKnown RBP17.42■□□□□ 0.38
ACTB-206ENST00000443528 C17orf80Q9BSJ5 609 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 TRAIPQ9BWF2 469 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 CCSER1Q9C0I3 900 aa17.42■□□□□ 0.38
ACTB-206ENST00000443528 TMEM161AQ9NX61 479 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms