RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 KSR1Q8IVT5 923 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 FAM177A1Q8N128 213 aaPredicted RBP13.48□□□□□ -0.25
TTC3-208ENST00000428693 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 EFHBQ8N7U6 833 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 CEP170P1Q96L14 293 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 CASD1Q96PB1 797 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 CWH43Q9H720 699 aa13.48□□□□□ -0.25
TTC3-208ENST00000428693 PIN4Q9Y237 131 aaKnown RBP13.48□□□□□ -0.25
TTC3-208ENST00000428693 STK36Q9NRP7 1315 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 DCXO43602 365 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 DKC1O60832 514 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■■■■■ 30
TTC3-208ENST00000428693 GCFC2P16383 781 aaKnown RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 KRT2P35908 639 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 UBE3AQ05086 875 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 TRIM29Q14134 588 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 TARBP2Q15633 366 aaKnown RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 ANO5Q75V66 913 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 TMEM87AQ8NBN3 555 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 FAM20AQ96MK3 541 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 MBOAT7Q96N66 472 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 POP1Q99575 1024 aaKnown RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 NAP1L4Q99733 375 aaKnown RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 TCF25Q9BQ70 676 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 JPH2Q9BR39 696 aaPredicted RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 APOL5Q9BWW9 433 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 INO80BQ9C086 356 aaPredicted RBP13.47□□□□□ -0.25
TTC3-208ENST00000428693 CYP26B1Q9NR63 512 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 PRKAG3Q9UGI9 489 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 INPP5FQ9Y2H2 1132 aa13.47□□□□□ -0.25
TTC3-208ENST00000428693 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 FAM205CA6NFA0 338 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 GPR37L1O60883 481 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 MAFO75444 373 aaPredicted RBP13.46□□□□□ -0.25
TTC3-208ENST00000428693 CTDNEP1O95476 244 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 P4HBP07237 508 aaKnown RBP13.46□□□□□ -0.25
TTC3-208ENST00000428693 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 SRGAP2BP0DMP2 458 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 PPM1AP35813 382 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 NEK4P51957 841 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 ANAPC15P60006 121 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
TTC3-208ENST00000428693 NR5A1Q13285 461 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 CTTNQ14247 550 aaKnown RBP13.46□□□□□ -0.25
TTC3-208ENST00000428693 XKR9Q5GH70 373 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 TPH2Q8IWU9 490 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 MRPS27Q92552 414 aaKnown RBP13.46□□□□□ -0.25
TTC3-208ENST00000428693 LPPQ93052 612 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 TMEM143Q96AN5 459 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 CCDC43Q96MW1 224 aaKnown RBP13.46□□□□□ -0.25
TTC3-208ENST00000428693 LXNQ9BS40 222 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 GBP3Q9H0R5 595 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 RGL1Q9NZL6 768 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 CLEC1BQ9P126 229 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 VAV3Q9UKW4 847 aa13.46□□□□□ -0.25
TTC3-208ENST00000428693 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
TTC3-208ENST00000428693 STBD1O95210 358 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 LARGE1O95461 756 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 EOMESO95936 686 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 TECP42680 631 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
TTC3-208ENST00000428693 PPP2R5CQ13362 524 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 ME3Q16798 604 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 EARS2Q5JPH6 523 aaKnown RBP13.45□□□□□ -0.26
TTC3-208ENST00000428693 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 B3GNT9Q6UX72 402 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 OTUD6AQ7L8S5 288 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 ZNF410Q86VK4 478 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
TTC3-208ENST00000428693 DYDC2Q96IM9 177 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 RPGRIP1Q96KN7 1286 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 MRPL9Q9BYD2 267 aaKnown RBP13.45□□□□□ -0.26
TTC3-208ENST00000428693 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 C11orf16Q9NQ32 467 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 RNF19AQ9NV58 838 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 MUTYHQ9UIF7 546 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 COL4A3BPQ9Y5P4 624 aa13.45□□□□□ -0.26
TTC3-208ENST00000428693 IGKV6-21A0A0C4DH24 114 aa13.44□□□□□ -0.26
TTC3-208ENST00000428693 HIDE1A8MVS5 230 aa13.44□□□□□ -0.26
TTC3-208ENST00000428693 GLP2RO95838 553 aa13.44□□□□□ -0.26
TTC3-208ENST00000428693 SKIP12755 728 aa13.44□□□□□ -0.26
TTC3-208ENST00000428693 YWHABP31946 246 aaKnown RBP13.44□□□□□ -0.26
TTC3-208ENST00000428693 PHKA2P46019 1235 aa13.44□□□□□ -0.26
TTC3-208ENST00000428693 PLCB3Q01970 1234 aa13.44□□□□□ -0.26
TTC3-208ENST00000428693 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
TTC3-208ENST00000428693 EPHA7Q15375 998 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms