RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 PLS1Q14651 629 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 DOK7Q18PE1 504 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 ADGRF4Q8IZF3 695 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 KRT35Q92764 455 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 ELMO3Q96BJ8 720 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 TLCD1Q96CP7 247 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 ZNF287Q9HBT7 754 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 ROBO3Q96MS0 1386 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.58□□□□□ -0.08
LRCH3-203ENST00000425562 LGR5O75473 907 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
LRCH3-203ENST00000425562 HOOK3Q86VS8 718 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 JAMLQ86YT9 394 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 HAS1Q92839 578 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 MRRFQ96E11 262 aaKnown RBP14.58□□□□□ -0.08
LRCH3-203ENST00000425562 NUCKS1Q9H1E3 243 aaKnown RBP14.58□□□□□ -0.08
LRCH3-203ENST00000425562 PCDHAC2Q9Y5I4 1007 aa14.58□□□□□ -0.08
LRCH3-203ENST00000425562 RARAP10276 462 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 NQO1P15559 274 aaKnown RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 RPL21P46778 160 aaKnown RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 SNX1Q13596 522 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 DDX60LQ5H9U9 1706 aaKnown RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 SFR1Q86XK3 245 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 LNX1Q8TBB1 728 aaPredicted RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.084e-11■□□□□ 10.3
LRCH3-203ENST00000425562 BTBD6Q96KE9 485 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 LZTS2Q9BRK4 669 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 ERP44Q9BS26 406 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 THAP2Q9H0W7 228 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 FAM114A2Q9NRY5 505 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 MTMR4Q9NYA4 1195 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 SLC12A4Q9UP95 1085 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 DAGLAQ9Y4D2 1042 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 PPP1R12AO14974 1030 aaPredicted RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 TCP10Q12799 353 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 CAPRIN2Q6IMN6 1127 aaKnown RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 CCDC65Q8IXS2 484 aa14.57□□□□□ -0.08
LRCH3-203ENST00000425562 PABPC3Q9H361 631 aaKnown RBP14.57□□□□□ -0.08
LRCH3-203ENST00000425562 SBF2Q86WG5 1849 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 PAEPP09466 180 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 ERFP50548 548 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 RMDN2Q96LZ7 410 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 TMEM237Q96Q45 408 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 FAM118BQ9BPY3 351 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 JMJD4Q9H9V9 463 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 ACP6Q9NPH0 428 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 LRRC4BQ9NT99 713 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 CCDC188H7C350 402 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 RASGRF2O14827 1237 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 PPFIA2O75334 1257 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 AP1G2O75843 785 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 AFPP02771 609 aaKnown RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 TRIM49P0CI25 452 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 TRIM49CP0CI26 452 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 IFI16Q16666 785 aaKnown RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 GNPTABQ3T906 1256 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 SYN2Q92777 582 aaPredicted RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 EDEM3Q9BZQ6 932 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 KCTD10Q9H3F6 313 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 CNOT10Q9H9A5 744 aaKnown RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 USP40Q9NVE5 1235 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 NOP53Q9NZM5 478 aaKnown RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 ZMYND8Q9ULU4 1186 aaPredicted RBP14.56□□□□□ -0.08
LRCH3-203ENST00000425562 RPTORQ8N122 1335 aa14.56□□□□□ -0.08
LRCH3-203ENST00000425562 TBC1D10BQ4KMP7 808 aaPredicted RBP14.55□□□□□ -0.08
LRCH3-203ENST00000425562 ZDHHC24Q6UX98 284 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 PHLDB2Q86SQ0 1253 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 PROM2Q8N271 834 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
LRCH3-203ENST00000425562 ZCWPW1Q9H0M4 648 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 ZDHHC18Q9NUE0 388 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 MED24O75448 989 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 ZBTB48P10074 688 aaPredicted RBP14.55□□□□□ -0.08
LRCH3-203ENST00000425562 MMP13P45452 471 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 SESN3P58005 492 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 KLRC3Q07444 240 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 MESDQ14696 234 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 TTC27Q6P3X3 843 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 PIGWQ7Z7B1 504 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 VPS36Q86VN1 386 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 ZFPM1Q8IX07 1006 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 CCDC105Q8IYK2 499 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 TBC1D16Q8TBP0 767 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 CALR3Q96L12 384 aaKnown RBP14.55□□□□□ -0.08
LRCH3-203ENST00000425562 RAB17Q9H0T7 212 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 SLITRK6Q9H5Y7 841 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 RIOX1Q9H6W3 641 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 NRAPQ86VF7 1730 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 TMEM120BA0PK00 339 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 CCDC169A6NNP5 214 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 GCNT3O95395 438 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 CYP11B2P19099 503 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 POLD1P28340 1107 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 SARNPP82979 210 aaKnown RBP14.55□□□□□ -0.08
LRCH3-203ENST00000425562 COG2Q14746 738 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 ARSHQ5FYA8 562 aa14.55□□□□□ -0.08
LRCH3-203ENST00000425562 PRUNE1Q86TP1 453 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms