RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CWH43Q9H720 699 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 ZSWIM4Q9H7M6 989 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 TTC12Q9H892 705 aaPredicted RBP10.39□□□□□ -0.75
NUP50-206ENST00000422489 CHST12Q9NRB3 414 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 DACT1Q9NYF0 836 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 WRAP73Q9P2S5 460 aaPredicted RBP10.39□□□□□ -0.75
NUP50-206ENST00000422489 PUF60Q9UHX1 559 aaKnown RBP10.39□□□□□ -0.75
NUP50-206ENST00000422489 PCDHGC5Q9Y5F6 944 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 A0A0U1RQF3 1178 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 EOMESO95936 686 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 LAG3P18627 525 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 SFPQP23246 707 aaKnown RBP eCLIP10.38□□□□□ -0.75
NUP50-206ENST00000422489 MCM7P33993 719 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 RFC5P40937 340 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 NDUFV1P49821 464 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 ERVFC1P60507 584 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 KRT17Q04695 432 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 DLX2Q07687 328 aaPredicted RBP10.38□□□□□ -0.75
NUP50-206ENST00000422489 ST3GAL1Q11201 340 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 ADAM15Q13444 863 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 GNL2Q13823 731 aaKnown RBP10.38□□□□□ -0.75
NUP50-206ENST00000422489 TWF2Q6IBS0 349 aaKnown RBP10.38□□□□□ -0.75
NUP50-206ENST00000422489 LRRC55Q6ZSA7 311 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 ADGRD2Q7Z7M1 963 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 ZNF410Q86VK4 478 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 GJD3Q8N144 294 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
NUP50-206ENST00000422489 CCDC43Q96MW1 224 aaKnown RBP10.38□□□□□ -0.75
NUP50-206ENST00000422489 ZNF558Q96NG5 402 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 TLE6Q9H808 572 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 CD320Q9NPF0 282 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 PIN4Q9Y237 131 aaKnown RBP10.38□□□□□ -0.75
NUP50-206ENST00000422489 FAM50BQ9Y247 325 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 COL4A3BPQ9Y5P4 624 aa10.38□□□□□ -0.75
NUP50-206ENST00000422489 PRRC2BQ5JSZ5 2229 aaKnown RBP10.37□□□□□ -0.75
NUP50-206ENST00000422489 CHD7Q9P2D1 2997 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 WNT7AO00755 349 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 NEMFO60524 1076 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 SKIP12755 728 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 CA8P35219 290 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 LTBRP36941 435 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 PBX3P40426 434 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 LAMTOR4Q0VGL1 99 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 ZNF174Q15697 407 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 KCNT2Q6UVM3 1135 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 TCP11Q8WWU5 503 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 PSPC1Q8WXF1 523 aaKnown RBP10.37□□□□□ -0.75
NUP50-206ENST00000422489 LPPQ93052 612 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 TLR9Q9NR96 1032 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 RNF19AQ9NV58 838 aa10.37□□□□□ -0.75
NUP50-206ENST00000422489 MICAL3Q7RTP6 2002 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 UNC80Q8N2C7 3258 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 CDH23Q9H251 3354 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 NT5C1B-RDH14C9J2C7 533 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 ASAP2O43150 1006 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 TECP42680 631 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 PHKA2P46019 1235 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 UBE3AQ05086 875 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 RNASELQ05823 741 aaKnown RBP10.36□□□□□ -0.75
NUP50-206ENST00000422489 SPIRE1Q08AE8 756 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
NUP50-206ENST00000422489 EMC2Q15006 297 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 CTC1Q2NKJ3 1217 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 CLLU1OSQ5K130 101 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 PLPP4Q5VZY2 271 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 MAEAQ7L5Y9 396 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 TMC7Q7Z402 723 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 SRGAP1Q7Z6B7 1085 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 LRRC43Q8N309 656 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 EFHBQ8N7U6 833 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 RNF149Q8NC42 400 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 PIGOQ8TEQ8 1089 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NUP50-206ENST00000422489 KHSRPQ92945 711 aaKnown RBP eCLIP10.36□□□□□ -0.751e-7■□□□□ 8.2
NUP50-206ENST00000422489 PGBD4Q96DM1 585 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 MTRQ99707 1265 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 HSD17B14Q9BPX1 270 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 LLPHQ9BRT6 129 aaKnown RBP10.36□□□□□ -0.75
NUP50-206ENST00000422489 TMEM60Q9H2L4 133 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 DHX33Q9H6R0 707 aaKnown RBP10.36□□□□□ -0.75
NUP50-206ENST00000422489 ENTPD7Q9NQZ7 604 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 ANKEF1Q9NU02 776 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 SPG21Q9NZD8 308 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 CD207Q9UJ71 328 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 INPP5FQ9Y2H2 1132 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 PPME1Q9Y570 386 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 KAT6AQ92794 2004 aa10.36□□□□□ -0.75
NUP50-206ENST00000422489 COL4A4P53420 1690 aaPredicted RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 COL4A6Q14031 1691 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 MBTPS2O43462 519 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 GAS2O43903 313 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 COL9A1P20849 921 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 ALDH7A1P49419 539 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 RBM25P49756 843 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 BCAR1P56945 870 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms