RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 UBE3AQ05086 875 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 CALCRLQ16602 461 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 CSPP1Q1MSJ5 1256 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 OTUD6AQ7L8S5 288 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 KSR1Q8IVT5 923 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 ABI1Q8IZP0 508 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 IGFLR1Q9H665 355 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 DHX33Q9H6R0 707 aaKnown RBP28.54■■■□□ 2.16
SMDT1-202ENST00000422252 PCDHA12Q9UN75 941 aa28.54■■■□□ 2.16
SMDT1-202ENST00000422252 EOMESO95936 686 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 GTF2F1P35269 517 aaKnown RBP eCLIP28.53■■■□□ 2.163e-17■■■□□ 15.1
SMDT1-202ENST00000422252 RFC5P40937 340 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 CYP4A11Q02928 519 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 CTTNQ14247 550 aaKnown RBP28.53■■■□□ 2.16
SMDT1-202ENST00000422252 CCDC83Q8IWF9 413 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 THNSL1Q8IYQ7 743 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 RNF169Q8NCN4 708 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 NLRP4Q96MN2 994 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 COL4A3BPQ9Y5P4 624 aa28.53■■■□□ 2.16
SMDT1-202ENST00000422252 NEMFO60524 1076 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 FGF18O76093 207 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 C8orf34Q49A92 452 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 LRRC55Q6ZSA7 311 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 ADGRD2Q7Z7M1 963 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 ZNF598Q86UK7 904 aaKnown RBP28.52■■■□□ 2.16
SMDT1-202ENST00000422252 TPH2Q8IWU9 490 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 FAM178BQ8IXR5 827 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 LRRC43Q8N309 656 aa28.52■■■□□ 2.16
SMDT1-202ENST00000422252 LLPHQ9BRT6 129 aaKnown RBP28.52■■■□□ 2.16
SMDT1-202ENST00000422252 PLXNA4Q9HCM2 1894 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 WNT7AO00755 349 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 SLITRK3O94933 977 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 SAFBQ15424 915 aaKnown RBP eCLIP28.51■■■□□ 2.15
SMDT1-202ENST00000422252 XKR9Q5GH70 373 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 CLLU1OSQ5K130 101 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 EIF2AK1Q9BQI3 630 aaKnown RBP28.51■■■□□ 2.15
SMDT1-202ENST00000422252 TRAIPQ9BWF2 469 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 TTC12Q9H892 705 aaPredicted RBP28.51■■■□□ 2.15
SMDT1-202ENST00000422252 IFT122Q9HBG6 1241 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 FAM50BQ9Y247 325 aa28.51■■■□□ 2.15
SMDT1-202ENST00000422252 GAS2O43903 313 aaKnown RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 ATF7P17544 494 aaPredicted RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 DLX2Q07687 328 aaPredicted RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 ADAM15Q13444 863 aa28.5■■■□□ 2.15
SMDT1-202ENST00000422252 CATSPER4Q7RTX7 472 aa28.5■■■□□ 2.15
SMDT1-202ENST00000422252 PRPF31Q8WWY3 499 aaKnown RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 PSPC1Q8WXF1 523 aaKnown RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 TMEM143Q96AN5 459 aa28.5■■■□□ 2.15
SMDT1-202ENST00000422252 ZSCAN31Q96LW9 406 aaPredicted RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 TLR9Q9NR96 1032 aa28.5■■■□□ 2.15
SMDT1-202ENST00000422252 PIN4Q9Y237 131 aaKnown RBP28.5■■■□□ 2.15
SMDT1-202ENST00000422252 ZBTB39O15060 712 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 LINC01565O15544 149 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 TXKP42681 527 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 PHKA2P46019 1235 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 GUCY1B3Q02153 619 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 EMC2Q15006 297 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 TWF2Q6IBS0 349 aaKnown RBP28.49■■■□□ 2.15
SMDT1-202ENST00000422252 HELQQ8TDG4 1101 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 MICAL1Q8TDZ2 1067 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 TCP11Q8WWU5 503 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 C8orf76Q96K31 380 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 MTMR9Q96QG7 549 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 KIF2CQ99661 725 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 HSD17B14Q9BPX1 270 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 CD320Q9NPF0 282 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 BMP2KQ9NSY1 1161 aaPredicted RBP28.49■■■□□ 2.15
SMDT1-202ENST00000422252 PCDHGC5Q9Y5F6 944 aa28.49■■■□□ 2.15
SMDT1-202ENST00000422252 TBX10O75333 385 aa28.48■■■□□ 2.15
SMDT1-202ENST00000422252 NRIP1P48552 1158 aa28.48■■■□□ 2.15
SMDT1-202ENST00000422252 KCNT2Q6UVM3 1135 aa28.48■■■□□ 2.15
SMDT1-202ENST00000422252 ZNF558Q96NG5 402 aa28.48■■■□□ 2.15
SMDT1-202ENST00000422252 SH2B1Q9NRF2 756 aaPredicted RBP28.48■■■□□ 2.15
SMDT1-202ENST00000422252 LZTS1Q9Y250 596 aa28.48■■■□□ 2.15
SMDT1-202ENST00000422252 LYPLA2O95372 231 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 SRGAP2CP0DJJ0 459 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 SKIP12755 728 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 PLCB3Q01970 1234 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 LAMTOR4Q0VGL1 99 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 SRGAP1Q7Z6B7 1085 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 GJD3Q8N144 294 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 EFHBQ8N7U6 833 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 MTRQ99707 1265 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 C1QTNF1Q9BXJ1 281 aa28.47■■■□□ 2.15
SMDT1-202ENST00000422252 MRPL9Q9BYD2 267 aaKnown RBP28.47■■■□□ 2.15
SMDT1-202ENST00000422252 ASAP2O43150 1006 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 ATP2B1P20020 1258 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 PPM1AP35813 382 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 NDUFV1P49821 464 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 RAB27AP51159 221 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 HMGN5P82970 282 aaKnown RBP28.46■■■□□ 2.15
SMDT1-202ENST00000422252 CLUL1Q15846 466 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 PDE12Q6L8Q7 609 aaKnown RBP28.46■■■□□ 2.15
SMDT1-202ENST00000422252 RBM23Q86U06 439 aaKnown RBP28.46■■■□□ 2.15
SMDT1-202ENST00000422252 MRPS27Q92552 414 aaKnown RBP28.46■■■□□ 2.15
SMDT1-202ENST00000422252 TLE6Q9H808 572 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 FAM105AQ9NUU6 356 aa28.46■■■□□ 2.15
SMDT1-202ENST00000422252 PUF60Q9UHX1 559 aaKnown RBP28.46■■■□□ 2.15
SMDT1-202ENST00000422252 FSCN2O14926 492 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 SSTR3P32745 418 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms