RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 HSPD1P10809 573 aaKnown RBP6.89□□□□□ -1.31
SBNO1-202ENST00000420886 TMPRSS15P98073 1019 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 TRIM60Q495X7 471 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 PLEKHA7Q6IQ23 1121 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 NME9Q86XW9 330 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 LZTS2Q9BRK4 669 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 TUBE1Q9UJT0 475 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 TEX33O43247 280 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 NSFP46459 744 aaKnown RBP6.89□□□□□ -1.31
SBNO1-202ENST00000420886 LPCAT2Q7L5N7 544 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 LRRC34Q8IZ02 419 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 TSSK1BQ9BXA7 367 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 RAB20Q9NX57 234 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 EDC4Q6P2E9 1401 aaKnown RBP6.89□□□□□ -1.31
SBNO1-202ENST00000420886 SHPRHQ149N8 1683 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 A0A1B0GW55 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4L2P0CJ85 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4L3P0CJ86 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4L4P0CJ87 422 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4L5P0CJ88 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4L6P0CJ89 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4L7P0CJ90 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 ACADVLP49748 655 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 SNX16P57768 344 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 ITGA9Q13797 1035 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 C16orf72Q14CZ0 275 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 TRIP10Q15642 601 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 KLHL38Q2WGJ6 581 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.89□□□□□ -1.31
SBNO1-202ENST00000420886 CDKL2Q92772 493 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 OTUD5Q96G74 571 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 STMN3Q9NZ72 180 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 VPS54Q9P1Q0 977 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 DUX4Q9UBX2 424 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 CITO14578 2027 aa6.89□□□□□ -1.31
SBNO1-202ENST00000420886 ERVK-7P63135 1459 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 SMAPO00193 183 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 MATN2O00339 956 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 MGRN1O60291 552 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 LPXNO60711 386 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 RPS6KA2Q15349 733 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 NEK8Q86SG6 692 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 BLOC1S6Q9UL45 172 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 AFF2P51816 1311 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 TOM1O60784 492 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PDE6AP16499 860 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 GARSP41250 739 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 ADCK1Q86TW2 530 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PABPC3Q9H361 631 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 MRGBPQ9NV56 204 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 LIMA1Q9UHB6 759 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 ZNF180Q9UJW8 692 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 NPATQ14207 1427 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 JAK1P23458 1154 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 KRT24Q2M2I5 525 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 TSGA10IPQ3SY00 556 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PPP4R3CPQ6ZMV5 832 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 USP38Q8NB14 1042 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 EPAS1Q99814 870 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 C1orf50Q9BV19 199 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PLGRKTQ9HBL7 147 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 GOLGA8IPA6NC78 632 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 BTBD18B2RXH4 712 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 TAF4O00268 1085 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 RAD51CO43502 376 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 LACTB2Q53H82 288 aaPredicted RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 KSR1Q8IVT5 923 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 SCUBE1Q8IWY4 988 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 SIX5Q8N196 739 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 FAXDC2Q96IV6 333 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 RANBP17Q9H2T7 1088 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 COMMD10Q9Y6G5 202 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 NUP153P49790 1475 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 BACH1O14867 736 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 ENO1P06733 434 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 LETM2Q2VYF4 491 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 WDR44Q5JSH3 913 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 ARL6IP4Q66PJ3 421 aaKnown RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 RFX8Q6ZV50 586 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 JADE3Q92613 823 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 USP44Q9H0E7 712 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 MAGI3Q5TCQ9 1506 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 TRIM43BA6NCK2 446 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 FGFR4P22455 802 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 KIF22Q14807 665 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 NONOQ15233 471 aaKnown RBP eCLIP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 ACCSLQ4AC99 568 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 MDM1Q8TC05 714 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 DPF2Q92785 391 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 KCNK16Q96T55 309 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 RRN3Q9NYV6 651 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 AMACRQ9UHK6 382 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 WDR19Q8NEZ3 1342 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 PPARGP37231 505 aaPredicted RBP6.88□□□□□ -1.31
SBNO1-202ENST00000420886 SLC5A9Q2M3M2 681 aa6.88□□□□□ -1.31
SBNO1-202ENST00000420886 CHP1Q99653 195 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms