RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CCSAPQ6IQ19 270 aaPredicted RBP7.58□□□□□ -1.2
CPS1-202ENST00000417946 AOPEPQ8N6M6 819 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 MLKLQ8NB16 471 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 ASAP3Q8TDY4 903 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 SCFD1Q8WVM8 642 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 TRAPPC12Q8WVT3 735 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 DUSP9Q99956 384 aaKnown RBP7.58□□□□□ -1.2
CPS1-202ENST00000417946 LRRC27Q9C0I9 530 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 IKZF4Q9H2S9 585 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 SEMA6BQ9H3T3 888 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 RNPEPQ9H4A4 650 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 GRPEL1Q9HAV7 217 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 PANK4Q9NVE7 773 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 RMND1Q9NWS8 449 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 KCND2Q9NZV8 630 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 TCEAL9Q9UHQ7 104 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 ODF2LQ9ULJ1 636 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 Q9Y3F1 56 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 PTCH2Q9Y6C5 1203 aa7.58□□□□□ -1.2
CPS1-202ENST00000417946 TRIM49BA6NDI0 452 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 GOLGA6L3A6NEY3 463 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 NOP56O00567 594 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 SEPT4O43236 478 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 DUSP11O75319 330 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 PPFIA4O75335 1185 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 CAVIN2O95810 425 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 INHAP05111 366 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 HSPA1AP0DMV8 641 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 HSPA1BP0DMV9 641 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 MYBP10242 640 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 HSPA8P11142 646 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 IDEP14735 1019 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 ZNF18P17022 549 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 MARK3P27448 753 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 HOXD10P28358 340 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 ERCC5P28715 1186 aaPredicted RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 NMT1P30419 496 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 HOXC8P31273 242 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 ARL2P36404 184 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 PRMT2P55345 433 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 GJA9P57773 515 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 BEX3Q00994 111 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 MTERF2Q49AM1 385 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 MARCH8Q5T0T0 291 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 CDKAL1Q5VV42 579 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 MFSD14CQ5VZR4 134 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 TTI2Q6NXR4 508 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 APTXQ7Z2E3 356 aaKnown RBP7.57□□□□□ -1.2
CPS1-202ENST00000417946 IRF2BP1Q8IU81 584 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 PPP1R13LQ8WUF5 828 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 KCNN1Q92952 543 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 CCDC34Q96HJ3 373 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 FAM167AQ96KS9 214 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 CEP170P1Q96L14 293 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 KCTD10Q9H3F6 313 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 SMARCAD1Q9H4L7 1026 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 SLC39A2Q9NP94 309 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 OLFML3Q9NRN5 406 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 EXOC1Q9NV70 894 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 FAM184BQ9ULE4 1060 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 CTNND2Q9UQB3 1225 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 MAPK8IP1Q9UQF2 711 aa7.57□□□□□ -1.2
CPS1-202ENST00000417946 FAM187AA6NFU0 413 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 LCE2BO14633 110 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 IKBKBO14920 756 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ZBTB24O43167 697 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 DKC1O60832 514 aaKnown RBP eCLIP7.56□□□□□ -1.2
CPS1-202ENST00000417946 TBCAO75347 108 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 MAFO75444 373 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 PGK1P00558 417 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 EDN1P05305 212 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ATP1A3P13637 1013 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 GAP43P17677 238 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 CST5P28325 142 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 RFC5P40937 340 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 CTCFP49711 727 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 SLC26A2P50443 739 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 NCKAP1LP55160 1127 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 STX17P56962 302 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 RTP1P59025 263 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ADAM17P78536 824 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 PURAQ00577 322 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 KCNA1Q09470 495 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 PSMD2Q13200 908 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 FSCN1Q16658 493 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 HERC4Q5GLZ8 1057 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 CT47A1Q5JQC4 288 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 CENPPQ6IPU0 288 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 LRRC55Q6ZSA7 311 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 TAS1R3Q7RTX0 852 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 TRMT1LQ7Z2T5 733 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 CCDC65Q8IXS2 484 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ZC3H3Q8IXZ2 948 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 GUF1Q8N442 669 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 KLHDC9Q8NEP7 349 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ENOX1Q8TC92 643 aaKnown RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 NELFBQ8WX92 580 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms