RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 DDX46Q7L014 1031 aaKnown RBP5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 ADGRE4PQ86SQ3 457 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 C11orf74Q86VG3 221 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 GPR135Q8IZ08 494 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 PLA2G15Q8NCC3 412 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 LEO1Q8WVC0 666 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 ZNF496Q96IT1 587 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 GPR101Q96P66 508 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 PCGF6Q9BYE7 350 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 SLKQ9H2G2 1235 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 PLA2G3Q9NZ20 509 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 MYPNQ86TC9 1320 aa5.15□□□□□ -1.59
HMGB3P23-201ENST00000414981 ELL2O00472 640 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 MUSKO15146 869 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 ZEB2O60315 1214 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 OPHN1O60890 802 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 CLSTN1O94985 981 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 APOL3O95236 402 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 IL2P60568 153 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 PUM1Q14671 1186 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 GRM7Q14831 915 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 PRKD1Q15139 912 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 GAGE13Q4V321 117 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 FRMD7Q6ZUT3 714 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 CLEC14AQ86T13 490 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 SHCBP1Q8NEM2 672 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 OR14K1Q8NGZ2 314 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 PPP1R14CQ8TAE6 165 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 GCDHQ92947 438 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 FAM89AQ96GI7 184 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 WNT8AQ9H1J5 351 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 POFUT1Q9H488 388 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 MTG2Q9H4K7 406 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 AGO3Q9H9G7 860 aaKnown RBP5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 POLR3BQ9NW08 1133 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 KCNG1Q9UIX4 513 aa5.14□□□□□ -1.59
HMGB3P23-201ENST00000414981 MYO15BQ96JP2 1530 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 FSBPO95073 299 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 BPIP17213 487 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 ADCYAP1R1P41586 468 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 FOXL1Q12952 345 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 RNF180Q86T96 592 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 RASSF3Q86WH2 238 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 SH3RF3Q8TEJ3 882 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 HIST1H2AHQ96KK5 128 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 OR14A2Q96R54 314 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 ADOQ96SZ5 270 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 HIST1H2AJQ99878 128 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 NOL10Q9BSC4 688 aaKnown RBP5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 MSRAQ9UJ68 235 aa5.13□□□□□ -1.59
HMGB3P23-201ENST00000414981 A0A0A6YYK5 440 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 GOLGA8BA8MQT2 603 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 JUNP05412 331 aaKnown RBP5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 VSIG10L2P0DP72 767 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 TNFRSF1AP19438 455 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 ACO1P21399 889 aaKnown RBP5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 KIR2DL3P43628 341 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 GPR15P49685 360 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 ADAM8P78325 824 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 RIN1Q13671 783 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 CCDC178Q5BJE1 867 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 THNSL2Q86YJ6 484 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 RSAD2Q8WXG1 361 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 USP7Q93009 1102 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 SOX7Q9BT81 388 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 TMX1Q9H3N1 280 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 CAAP1Q9H8G2 361 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 EMC7Q9NPA0 242 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 DNAI1Q9UI46 699 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 RBM8AQ9Y5S9 174 aaKnown RBP5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 NUMBLQ9Y6R0 609 aa5.12□□□□□ -1.59
HMGB3P23-201ENST00000414981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 MATN3O15232 486 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 RAB11FIP3O75154 756 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 PFKMP08237 780 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 MSX2P35548 267 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 MASP1P48740 699 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 BPIFB4P59827 614 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 HHEXQ03014 270 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 TCIRG1Q13488 830 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 ATP13A4Q4VNC1 1196 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 BROXQ5VW32 411 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 SPRED1Q7Z699 444 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 CDYL2Q8N8U2 506 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 ANKRD53Q8N9V6 530 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 SLC5A5Q92911 643 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 RPL10LQ96L21 214 aaKnown RBP5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 GPHA2Q96T91 129 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 IFT22Q9H7X7 185 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 C14orf93Q9H972 538 aaKnown RBP5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 NOC2LQ9Y3T9 749 aaKnown RBP5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 PCDHB6Q9Y5E3 794 aa5.11□□□□□ -1.59
HMGB3P23-201ENST00000414981 A0A1W2PRX2 142 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 PRSS38A1L453 326 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 PLSCR1O15162 318 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 ULK1O75385 1050 aa5.1□□□□□ -1.59
HMGB3P23-201ENST00000414981 PCDH8O95206 1070 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms