RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 RIT2Q99578 217 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 CAPN7Q9Y6W3 813 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 A0A1W2PQJ5 194 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 BUB1BO60566 1050 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 CATSPER3Q86XQ3 398 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 TMEM35BQ8NCS4 154 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 CALR3Q96L12 384 aaKnown RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 SLC9A2Q9UBY0 812 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 NOVA2Q9UNW9 492 aaKnown RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 SNX24Q9Y343 169 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 NUB1Q9Y5A7 615 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 HMGB1P1B2RPK0 211 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 SLCO1A2P46721 670 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 DYNLT1P63172 113 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 TRIP13Q15645 432 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 REXO1L1PQ8IX06 675 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 CCHCR1Q8TD31 782 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.352e-7■■■■■ 36.2
ABCA13-201ENST00000411975 TIPINQ9BVW5 301 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 EHD4Q9H223 541 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 CNOT7Q9UIV1 285 aaKnown RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 MCF2LO15068 1137 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 CTNND1O60716 968 aaKnown RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 ZRANB2O95218 330 aaKnown RBP eCLIP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 ACTN1P12814 892 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 ANXA13P27216 316 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 LIG3P49916 1009 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 YWHAGP61981 247 aaKnown RBP eCLIP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 MYO1EQ12965 1108 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 TTI2Q6NXR4 508 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 ANKRD7Q92527 254 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
ABCA13-201ENST00000411975 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
ABCA13-201ENST00000411975 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 RASGRF2O14827 1237 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 FMO5P49326 533 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 KLK7P49862 253 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 CDKAL1Q5VV42 579 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 ZNF564Q8TBZ8 553 aaPredicted RBP12.85□□□□□ -0.35
ABCA13-201ENST00000411975 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 C11orf70Q9BRQ4 267 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 PFASO15067 1338 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 TARSL2A2RTX5 802 aaKnown RBP12.85□□□□□ -0.35
ABCA13-201ENST00000411975 ZNF211Q13398 564 aaPredicted RBP12.85□□□□□ -0.35
ABCA13-201ENST00000411975 OR6B2Q6IFH4 312 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 ENOSF1Q7L5Y1 443 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 CCDC117Q8IWD4 279 aaPredicted RBP12.85□□□□□ -0.35
ABCA13-201ENST00000411975 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
ABCA13-201ENST00000411975 MAD1L1Q9Y6D9 718 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 CYP11B2P19099 503 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 SLC9A1P19634 815 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 ZNF568Q3ZCX4 644 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 PPFIBP2Q8ND30 876 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 NSMCE1Q8WV22 266 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 NACA2Q9H009 215 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 APEX2Q9UBZ4 518 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
ABCA13-201ENST00000411975 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 DGAT1O75907 488 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 NR3C2P08235 984 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 ZNF18P17022 549 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 NME8Q8N427 588 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 ZNF185O15231 689 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 MSH4O15457 936 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 TBXAS1P24557 533 aaPredicted RBP12.84□□□□□ -0.35
ABCA13-201ENST00000411975 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 ZC2HC1CQ53FD0 456 aaPredicted RBP12.84□□□□□ -0.35
ABCA13-201ENST00000411975 CYFIP1Q7L576 1253 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 SYT2Q8N9I0 419 aaPredicted RBP12.84□□□□□ -0.35
ABCA13-201ENST00000411975 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 POLR3CQ9BUI4 534 aaPredicted RBP12.84□□□□□ -0.35
ABCA13-201ENST00000411975 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 CNOT10Q9H9A5 744 aaKnown RBP12.84□□□□□ -0.35
ABCA13-201ENST00000411975 L2HGDHQ9H9P8 463 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 HSPBP1Q9NZL4 362 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 CIB2O75838 187 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 GGCXP38435 758 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 ACER1Q8TDN7 264 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
ABCA13-201ENST00000411975 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
ABCA13-201ENST00000411975 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms